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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G265600.1 Wheat golgi, peroxisome, plasma membrane 68.31 76.27
TraesCS6B01G314000.1 Wheat golgi, peroxisome, plasma membrane 67.74 75.96
TraesCS6A01G285200.1 Wheat golgi, peroxisome, plasma membrane 67.36 75.85
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 57.69 65.1
EES07345 Sorghum golgi, peroxisome, plasma membrane 55.22 61.91
Os02t0722400-01 Rice endoplasmic reticulum, plasma membrane 52.37 61.06
Zm00001d017880_P006 Maize plasma membrane 53.32 57.23
CDX87155 Canola plasma membrane 35.86 53.69
KRH14179 Soybean plasma membrane 37.57 52.38
KRG93981 Soybean plasma membrane 29.6 50.98
GSMUA_Achr3P10920_001 Banana plasma membrane 44.21 50.0
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 42.13 47.74
VIT_19s0015g01300.t01 Wine grape plasma membrane 40.99 47.16
KRG98405 Soybean plasma membrane 41.18 47.07
KRH73957 Soybean plasma membrane 40.99 46.85
KRH46488 Soybean plasma membrane 40.99 46.85
KRG98404 Soybean plasma membrane 40.04 45.77
VIT_19s0015g01290.t01 Wine grape plasma membrane 40.8 45.55
Bra026481.1-P Field mustard plasma membrane 39.85 44.97
HORVU2Hr1G084780.1 Barley extracellular 19.35 44.54
CDY16869 Canola plasma membrane 39.47 44.26
PGSC0003DMT400057313 Potato plasma membrane 38.14 44.08
AT5G23810.1 Thale cress plasma membrane 38.9 43.9
Solyc07g066010.2.1 Tomato plasma membrane 37.95 43.86
KRG98402 Soybean plasma membrane 37.76 43.07
Solyc07g066020.2.1 Tomato plasma membrane 38.33 42.98
PGSC0003DMT400057311 Potato plasma membrane 38.33 42.8
HORVU3Hr1G091110.1 Barley cytosol, vacuole 9.49 42.37
KRH14166 Soybean plasma membrane 35.48 41.65
KRH73962 Soybean plasma membrane 37.57 41.51
KRH46483 Soybean plasma membrane 24.86 40.06
HORVU5Hr1G037660.1 Barley plasma membrane 36.24 39.87
HORVU3Hr1G091120.3 Barley plasma membrane 35.86 39.38
HORVU2Hr1G111140.3 Barley golgi 36.81 39.11
HORVU2Hr1G061190.4 Barley plasma membrane 35.1 38.14
HORVU4Hr1G043680.3 Barley plasma membrane 35.1 37.91
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 33.59 37.9
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 35.29 37.65
HORVU7Hr1G088510.2 Barley plasma membrane 32.07 36.82
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 34.16 36.73
HORVU7Hr1G038330.1 Barley plasma membrane 33.4 35.77
HORVU3Hr1G091020.2 Barley mitochondrion 35.86 35.59
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 34.16 34.82
HORVU3Hr1G091070.1 Barley cytosol 29.6 34.06
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 32.64 32.76
HORVU2Hr1G084710.1 Barley plasma membrane 23.15 32.71
Protein Annotations
EnsemblPlants:HORVU6Hr1G071810.8EnsemblPlantsGene:HORVU6Hr1G071810GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF228PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000B4847B3
UniProt:A0A287ULX5MapMan:24.2.3.4.1::::
Description
No Description!
Coordinates
chrchr6H:-:498966248..498974423
Molecular Weight (calculated)
55616.4 Da
IEP (calculated)
10.107
GRAVY (calculated)
0.163
Length
527 amino acids
Sequence
(BLAST)
001: MGGRGGDPQT GPLLEKLPES SCSSSEEHPV KRTGTVWTAS AHIITAVVGS GVLSLAWSVA QLGWVGGPAA IVFFAGVTVV QSSLLAECYV SRGDPERGGV
101: IRNKSYMDAV RFYLGEKRQM LSGFFLSISL FGSGVVYTLT TATSMRAIHE ANHYGREGHG APFSSAAARG SDVYYMLLFG LAQAVLSQIP DFHNMAWLSV
201: FAAVMSFFYS FVGFGLGAAK VIENGVIKGG IGGIPLASPM QKVWRVAQSL GDITFAYPYT LVLLEIEDTL RSPPAESKTM KAASRASIAI TTFFYLGCGC
301: FGYAAFGDGT PGNLLTGFGE PYWLIDLANL CVVLHLLGGY QARALVLLSY ICTACNRHLA SPDVISRVNY VCSAVQPAGV RARGAAVRGG GLVGRQGGAA
401: AARLALPCER VQAVLSHGVR GGGDGGGHVV PLLQPGGGAD RRLHLLAAGH PLPSGNVPRA GQGGAVDDAV ARHPGLQRHL PARRRLRLRW VRRGGVRPRQ
501: KLRASPSIRF LEREIASFGD APGKKSV
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.