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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 2
  • plasma membrane 4
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G084780.1 Barley extracellular 44.5 72.49
TraesCS2D01G346500.1 Wheat plasma membrane 77.48 57.57
HORVU3Hr1G091110.1 Barley cytosol, vacuole 15.28 48.31
Zm00001d050211_P001 Maize peroxisome 57.91 47.58
EES13588 Sorghum cytosol, peroxisome, plasma membrane 61.13 45.78
HORVU4Hr1G043680.3 Barley plasma membrane 59.25 45.29
HORVU5Hr1G037660.1 Barley plasma membrane 56.57 44.05
HORVU3Hr1G091070.1 Barley cytosol 52.81 43.01
CDY60629 Canola plasma membrane 46.38 41.69
HORVU3Hr1G091120.3 Barley plasma membrane 53.62 41.67
VIT_10s0116g01380.t01 Wine grape plasma membrane 49.6 40.84
PGSC0003DMT400030727 Potato plasma membrane 51.21 40.38
GSMUA_Achr10P... Banana plasma membrane 45.04 40.29
CDY43761 Canola plasma membrane 50.13 40.13
Solyc06g060110.2.1 Tomato plasma membrane 50.67 40.13
Bra029199.1-P Field mustard plasma membrane 49.87 39.91
Bra024241.1-P Field mustard plasma membrane 49.87 39.91
CDX87522 Canola plasma membrane 50.67 39.71
CDX88364 Canola plasma membrane 50.67 39.71
CDX88365 Canola plasma membrane 50.67 39.71
CDY31348 Canola plasma membrane 49.6 39.7
CDX84450 Canola plasma membrane 49.6 39.7
GSMUA_Achr2P20670_001 Banana plasma membrane 46.92 39.68
Bra015673.1-P Field mustard plasma membrane 50.4 39.5
AT5G63850.1 Thale cress plasma membrane 49.33 39.48
CDY39844 Canola plasma membrane 49.33 39.48
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 51.21 39.38
AT1G77380.1 Thale cress plasma membrane 49.87 39.08
PGSC0003DMT400015426 Potato plasma membrane 50.13 39.04
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 46.65 38.93
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 51.47 38.87
PGSC0003DMT400043280 Potato plasma membrane 48.26 38.46
Solyc11g005070.1.1 Tomato plasma membrane 49.06 38.45
KRH53283 Soybean golgi, peroxisome, plasma membrane 50.13 38.4
KRH64623 Soybean cytosol, peroxisome, plasma membrane 50.13 38.4
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 49.33 38.25
CDX69918 Canola plasma membrane 49.33 37.94
CDY21569 Canola plasma membrane 49.06 37.73
HORVU3Hr1G091020.2 Barley mitochondrion 53.62 37.66
CDY47793 Canola plasma membrane 47.99 37.6
Bra009371.1-P Field mustard plasma membrane 48.79 37.53
CDX81121 Canola plasma membrane 48.79 37.37
CDX78353 Canola plasma membrane 48.79 37.37
KRH16402 Soybean plasma membrane 47.99 37.37
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 49.33 37.32
CDY14972 Canola plasma membrane 47.45 37.18
Bra036939.1-P Field mustard plasma membrane 47.45 37.18
Bra006016.1-P Field mustard plasma membrane 48.53 37.17
KRH17988 Soybean plasma membrane 47.45 36.95
AT1G44100.1 Thale cress plasma membrane 46.92 36.46
CDY36017 Canola plasma membrane 46.92 36.38
HORVU7Hr1G088510.2 Barley plasma membrane 44.5 36.17
Bra014020.1-P Field mustard plasma membrane 46.38 35.97
Bra032199.1-P Field mustard plasma membrane 46.38 35.52
CDY43854 Canola plasma membrane 46.38 35.52
PGSC0003DMT400008650 Potato plasma membrane 43.97 35.34
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 46.38 35.31
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 43.43 34.84
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 43.43 34.69
VIT_07s0031g02340.t01 Wine grape peroxisome 51.74 34.28
HORVU2Hr1G061190.4 Barley plasma membrane 44.5 34.23
HORVU7Hr1G038330.1 Barley plasma membrane 44.77 33.94
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 45.58 32.88
CDY71454 Canola golgi, peroxisome, plasma membrane 24.4 32.5
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 39.68 31.69
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 41.82 29.71
HORVU2Hr1G111140.3 Barley golgi 37.27 28.02
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 32.71 23.15
Protein Annotations
EnsemblPlants:HORVU2Hr1G084710.1EnsemblPlantsGene:HORVU2Hr1G084710GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF255PFAM:PF01490SEG:segSignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI000B477E03UniProt:A0A287IQS5MapMan:24.2.3.4.1:::
Description
No Description!
Coordinates
chrchr2H:+:612889244..612895370
Molecular Weight (calculated)
40152.6 Da
IEP (calculated)
7.710
GRAVY (calculated)
0.742
Length
373 amino acids
Sequence
(BLAST)
001: MTLFAVVIYY TSALLADCYS ASDPVSGPHN LTYMAVVGAT LCGSMVKLCG TVQFINLVGF GIGITIAATG SMLGIKEADC FHKEGHKAHC SSSSMIPYIA
101: IYGIMEICFS QIPGLDSLWW LSTVTTVMSL TYTTIGISFG VVQIKANGGL HGSLTGVAVG NNITVMQKVW HGLEAFGNMA FAYAFSIVLL EIQNTLKAAA
201: PSKAKVMKKA TAVNVAVTAV IYLLCGCMGY VAFGDGFRIY EPLWLLDVAN VVVAVHLVGT YQVISQPIFD YVELHAAAAW PDTGFVSTRD VRLWPTDVHV
301: AVCMLRLIGR TAYVCLTTGV VMAMPFFGFV VGLIGAVSFW PLTVYFPVSM YIAERHVPRG STRWLLLQAL STV
Best Arabidopsis Sequence Match ( AT1G58360.1 )
(BLAST)
001: MKSFNTEGHN HSTAESGDAY TVSDPTKNVD EDGREKRTGT WLTASAHIIT AVIGSGVLSL AWAIAQLGWI AGTSILLIFS FITYFTSTML ADCYRAPDPV
101: TGKRNYTYMD VVRSYLGGRK VQLCGVAQYG NLIGVTVGYT ITASISLVAV GKSNCFHDKG HTADCTISNY PYMAVFGIIQ VILSQIPNFH KLSFLSIMAA
201: VMSFTYATIG IGLAIATVAG GKVGKTSMTG TAVGVDVTAA QKIWRSFQAV GDIAFAYAYA TVLIEIQDTL RSSPAENKAM KRASLVGVST TTFFYILCGC
301: IGYAAFGNNA PGDFLTDFGF FEPFWLIDFA NACIAVHLIG AYQVFAQPIF QFVEKKCNRN YPDNKFITSE YSVNVPFLGK FNISLFRLVW RTAYVVITTV
401: VAMIFPFFNA ILGLIGAASF WPLTVYFPVE MHIAQTKIKK YSARWIALKT MCYVCLIVSL LAAAGSIAGL ISSVKTYKPF RTMHE
Arabidopsis Description
AAP1NAT2 [Source:UniProtKB/TrEMBL;Acc:A0A178WEG7]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.