Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g01830.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G63850.1 | VIT_10s0003g01830.t01 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01380.t01 | Wine grape | plasma membrane | 69.98 | 86.98 |
| VIT_18s0001g02020.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 71.4 | 83.58 |
| CDX78353 | Canola | plasma membrane | 67.14 | 77.62 |
| AT5G09220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 67.85 | 77.48 |
| Bra006016.1-P | Field mustard | plasma membrane | 66.96 | 77.41 |
| CDX81121 | Canola | plasma membrane | 66.61 | 77.0 |
| AT5G63850.1 | Thale cress | plasma membrane | 63.23 | 76.39 |
| CDY21569 | Canola | plasma membrane | 65.72 | 76.29 |
| CDX69918 | Canola | plasma membrane | 65.72 | 76.29 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, vacuole | 55.95 | 76.27 |
| CDY31348 | Canola | plasma membrane | 63.06 | 76.18 |
| CDY39844 | Canola | plasma membrane | 63.06 | 76.18 |
| Bra029199.1-P | Field mustard | plasma membrane | 62.88 | 75.97 |
| Bra009371.1-P | Field mustard | plasma membrane | 65.36 | 75.88 |
| VIT_07s0031g02440.t01 | Wine grape | plasma membrane | 46.18 | 75.58 |
| GSMUA_Achr2P20670_001 | Banana | plasma membrane | 58.97 | 75.28 |
| GSMUA_Achr3P02860_001 | Banana | peroxisome, plasma membrane, vacuole | 59.68 | 75.17 |
| GSMUA_Achr1P28270_001 | Banana | peroxisome, plasma membrane, vacuole | 58.44 | 75.11 |
| GSMUA_Achr10P... | Banana | plasma membrane | 55.42 | 74.82 |
| CDY43761 | Canola | plasma membrane | 61.81 | 74.68 |
| Bra024241.1-P | Field mustard | plasma membrane | 61.63 | 74.46 |
| CDX84450 | Canola | plasma membrane | 61.28 | 74.03 |
| TraesCS1D01G264700.1 | Wheat | golgi, peroxisome, vacuole | 64.3 | 73.88 |
| GSMUA_Achr6P12890_001 | Banana | peroxisome, plasma membrane, vacuole | 63.59 | 73.81 |
| TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 63.77 | 73.12 |
| TraesCS3A01G406800.1 | Wheat | plasma membrane | 60.57 | 73.02 |
| HORVU1Hr1G064970.10 | Barley | golgi, mitochondrion, peroxisome | 63.94 | 72.87 |
| Zm00001d010231_P001 | Maize | plasma membrane | 61.81 | 72.8 |
| OQU78029 | Sorghum | cytosol, peroxisome, plasma membrane | 62.52 | 72.58 |
| HORVU3Hr1G091110.1 | Barley | cytosol, vacuole | 15.1 | 72.03 |
| Zm00001d053143_P002 | Maize | plasma membrane | 60.39 | 72.03 |
| Os05t0424000-01 | Rice | cytosol, plasma membrane, vacuole | 63.41 | 71.98 |
| GSMUA_Achr8P08250_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 63.59 | 71.74 |
| Os01t0882800-01 | Rice | plasma membrane | 62.17 | 71.72 |
| HORVU3Hr1G091120.3 | Barley | plasma membrane | 61.1 | 71.67 |
| TraesCS3A01G406900.1 | Wheat | plasma membrane | 61.1 | 71.67 |
| EES08162 | Sorghum | plasma membrane | 60.75 | 71.1 |
| TraesCS3D01G402200.1 | Wheat | plasma membrane | 60.75 | 70.95 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 60.39 | 70.83 |
| Os11t0195600-01 | Rice | cytosol, plasma membrane, vacuole | 59.86 | 70.8 |
| VIT_03s0038g02290.t01 | Wine grape | golgi, mitochondrion, peroxisome, plasma membrane | 64.3 | 70.7 |
| Zm00001d042619_P002 | Maize | plasma membrane | 61.99 | 70.65 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 60.21 | 70.62 |
| TraesCS3A01G407000.1 | Wheat | plasma membrane | 60.21 | 70.62 |
| Zm00001d023603_P001 | Maize | plasma membrane | 46.36 | 70.54 |
| EES03989 | Sorghum | plasma membrane | 61.28 | 70.26 |
| Zm00001d023593_P001 | Maize | plasma membrane | 58.79 | 69.39 |
| EES16763 | Sorghum | plasma membrane | 59.15 | 69.23 |
| TraesCS3D01G402300.1 | Wheat | plasma membrane | 60.57 | 69.17 |
| HORVU5Hr1G037660.1 | Barley | plasma membrane | 58.44 | 68.68 |
| EES16764 | Sorghum | plasma membrane | 58.79 | 68.67 |
| TraesCS5D01G125700.1 | Wheat | plasma membrane | 58.26 | 68.48 |
| TraesCS5A01G115100.1 | Wheat | plasma membrane | 58.26 | 68.48 |
| Zm00001d023596_P001 | Maize | cytosol, peroxisome, plasma membrane | 58.61 | 68.46 |
| HORVU4Hr1G043680.3 | Barley | plasma membrane | 59.33 | 68.44 |
| Os12t0181500-01 | Rice | plasma membrane | 57.73 | 68.42 |
| Os12t0181600-01 | Rice | plasma membrane | 57.73 | 68.42 |
| EES16761 | Sorghum | plasma membrane | 58.08 | 68.41 |
| TraesCS4D01G097400.1 | Wheat | plasma membrane | 59.15 | 68.38 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 58.08 | 68.27 |
| EES15765 | Sorghum | plasma membrane | 58.08 | 68.27 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 58.97 | 68.17 |
| Zm00001d023592_P001 | Maize | plasma membrane | 58.08 | 68.12 |
| TraesCS4A01G215300.1 | Wheat | plasma membrane | 58.79 | 68.11 |
| GSMUA_Achr8P32600_001 | Banana | plasma membrane | 65.36 | 67.28 |
| HORVU3Hr1G091070.1 | Barley | cytosol | 53.29 | 65.5 |
| EES08159 | Sorghum | cytosol, peroxisome, plasma membrane | 56.31 | 65.23 |
| KXG23123 | Sorghum | mitochondrion, plastid | 57.9 | 64.94 |
| HORVU3Hr1G091020.2 | Barley | mitochondrion | 61.1 | 64.78 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 64.3 | 64.64 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 60.92 | 64.6 |
| Zm00001d004705_P001 | Maize | plasma membrane | 51.69 | 64.1 |
| Zm00001d041842_P002 | Maize | mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 57.73 | 63.35 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 51.69 | 61.78 |
| TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 51.69 | 61.39 |
| TraesCS5D01G129000.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.56 | 60.52 |
| KXG23106 | Sorghum | cytosol, peroxisome, plasma membrane | 51.15 | 59.75 |
| HORVU2Hr1G084780.1 | Barley | extracellular | 23.98 | 58.95 |
| Zm00001d050211_P001 | Maize | peroxisome | 47.25 | 58.59 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 50.44 | 57.37 |
| VIT_18s0001g08270.t01 | Wine grape | plasma membrane | 49.2 | 57.35 |
| EES13588 | Sorghum | cytosol, peroxisome, plasma membrane | 50.44 | 57.03 |
| TraesCS3A01G065600.1 | Wheat | plasma membrane | 46.18 | 56.52 |
| VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 44.94 | 55.24 |
| TraesCS7D01G388300.1 | Wheat | plasma membrane | 51.15 | 54.65 |
| VIT_04s0008g00240.t01 | Wine grape | plasma membrane | 45.65 | 53.99 |
| TraesCS2D01G346500.1 | Wheat | plasma membrane | 47.25 | 52.99 |
| VIT_04s0008g00230.t01 | Wine grape | plasma membrane | 44.05 | 52.21 |
| VIT_04s0008g00280.t01 | Wine grape | plasma membrane | 44.41 | 52.19 |
| VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 43.69 | 52.12 |
| HORVU2Hr1G084710.1 | Barley | plasma membrane | 34.28 | 51.74 |
| VIT_18s0041g01270.t01 | Wine grape | plasma membrane | 39.79 | 49.23 |
| VIT_18s0041g01250.t01 | Wine grape | plasma membrane | 34.46 | 44.39 |
| VIT_18s0041g01240.t01 | Wine grape | plasma membrane | 33.75 | 44.08 |
| Os12t0195100-00 | Rice | plastid | 38.19 | 43.35 |
| VIT_04s0008g00250.t01 | Wine grape | plasma membrane | 44.41 | 42.37 |
| TraesCS2D01G347000.2 | Wheat | cytosol, plasma membrane, vacuole | 34.99 | 38.03 |
| TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 34.28 | 37.55 |
Protein Annotations
| EntrezGene:100242414 | wikigene:100242414 | EntrezGene:100854314 | wikigene:100854314 | EntrezGene:100855309 | wikigene:100855309 |
| MapMan:24.2.3.4.1 | InterPro:AA_transpt_TM | EMBL:AM452788 | ProteinID:CAN65437 | ProteinID:CAN65437.1 | ProteinID:CCB47148 |
| ProteinID:CCB47148.1 | UniProt:F6H4D7 | EMBL:FN595233 | GO:GO:0003333 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015171 |
| GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100242414 | wikigene:LOC100242414 | EntrezGene:LOC100854314 | wikigene:LOC100854314 |
| EntrezGene:LOC100855309 | wikigene:LOC100855309 | PFAM:PF01490 | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF350 | TMHMM:TMhelix |
| UniParc:UPI0002109A8E | ArrayExpress:VIT_07s0031g02340 | EnsemblPlantsGene:VIT_07s0031g02340 | EnsemblPlants:VIT_07s0031g02340.t01 | RefSeq:XP_002275881 | RefSeq:XP_002275881.1 |
| RefSeq:XP_003632520 | RefSeq:XP_003632520.1 | RefSeq:XP_003634860 | RefSeq:XP_003634860.1 | RefSeq:XP_003635029 | RefSeq:XP_003635029.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:18469572..18473342
Molecular Weight (calculated)
61973.0 Da
IEP (calculated)
9.192
GRAVY (calculated)
0.349
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENAATKNH HHHHQVFDIS IDVLPHQNTS KCFDDDGRLK RTGTVWTASA HIITAVIGSG VLSLAWAIAQ LGWIAGPAVM FLFSFVIYYT SSLLADCYRS
101: GDRVSGKRNY TYMDAVRSNL GGVKVKVCGL IQYLNIFGVA IGYTIAASIS MMAVKRSNCF HESGRKNPCH ISSYPYMIMF GIAEIAFSQI PDFDQIWWLS
201: IVAAVMSFTY SSIGLALGVA KVVAAGGFKG SLTGISIGTV TQTQKIWRSF QALGDIAFAY SYSIILIEIQ DTLKSPPSES KTMKKATLVS IAVTTAFYML
301: CGCMGYAAFG DLAPGNLLTG FGFYNPYWLL DIANVAIVVH LVGAYQVYCQ PLFAFTEKWA AQKWPHSDFI TKEIKIPIPG CSPFSLNLFR LVWRSAFVVV
401: TTVISMLLPF FNDVVGILGA FGFWPLTVYF PVEMYIVQKK IPKWSTRWIC LQMLSVACLI ISIAAAAGSI AGVVLDLKSA PPPKVLLIST AETEKRRYKA
501: NEEITEGIEK IIATWMAHKK SSSPPPTHPS TVNTSLVFPF IMLLKKIQGK VIDPERPEGE MRN
101: GDRVSGKRNY TYMDAVRSNL GGVKVKVCGL IQYLNIFGVA IGYTIAASIS MMAVKRSNCF HESGRKNPCH ISSYPYMIMF GIAEIAFSQI PDFDQIWWLS
201: IVAAVMSFTY SSIGLALGVA KVVAAGGFKG SLTGISIGTV TQTQKIWRSF QALGDIAFAY SYSIILIEIQ DTLKSPPSES KTMKKATLVS IAVTTAFYML
301: CGCMGYAAFG DLAPGNLLTG FGFYNPYWLL DIANVAIVVH LVGAYQVYCQ PLFAFTEKWA AQKWPHSDFI TKEIKIPIPG CSPFSLNLFR LVWRSAFVVV
401: TTVISMLLPF FNDVVGILGA FGFWPLTVYF PVEMYIVQKK IPKWSTRWIC LQMLSVACLI ISIAAAAGSI AGVVLDLKSA PPPKVLLIST AETEKRRYKA
501: NEEITEGIEK IIATWMAHKK SSSPPPTHPS TVNTSLVFPF IMLLKKIQGK VIDPERPEGE MRN
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.