Factsheet for VIT_18s0041g01240.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
golgi 5
plasma membrane 8
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	golgi, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g01250.t01	Wine grape	plasma membrane	81.21	80.09
VIT_18s0041g01270.t01	Wine grape	plasma membrane	54.29	51.43
GSMUA_Achr8P08340_001	Banana	plasma membrane	53.36	49.89
VIT_07s0031g02440.t01	Wine grape	plasma membrane	34.57	43.31
VIT_18s0001g08270.t01	Wine grape	plasma membrane	48.26	43.06
VIT_19s0015g01300.t01	Wine grape	plasma membrane	45.71	43.01
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.94	41.16
VIT_19s0015g01290.t01	Wine grape	plasma membrane	44.08	40.25
VIT_10s0116g01380.t01	Wine grape	plasma membrane	41.3	39.29
VIT_04s0008g00230.t01	Wine grape	plasma membrane	42.46	38.53
VIT_03s0038g02290.t01	Wine grape	golgi, mitochondrion, peroxisome, plasma membrane	45.48	38.28
VIT_04s0008g00280.t01	Wine grape	plasma membrane	42.0	37.79
VIT_04s0008g00240.t01	Wine grape	plasma membrane	41.53	37.6
VIT_07s0031g02340.t01	Wine grape	peroxisome	44.08	33.75
VIT_04s0008g00250.t01	Wine grape	plasma membrane	42.23	30.85

Protein Annotations

EntrezGene:100260163	wikigene:100260163	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	ProteinID:CBI39293	ProteinID:CBI39293.3
UniProt:D7U979	EMBL:FN596744	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100260163	wikigene:LOC100260163	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF274
TMHMM:TMhelix	UniParc:UPI00015C94AA	ArrayExpress:VIT_18s0041g01240	EnsemblPlantsGene:VIT_18s0041g01240	EnsemblPlants:VIT_18s0041g01240.t01	RefSeq:XP_002280172
RefSeq:XP_002280172.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:+:25876273..25883232

Molecular Weight (calculated)

47781.0 Da

IEP (calculated)

9.334

GRAVY (calculated)

0.618

Length

431 amino acids

Sequence
(BLAST)

001: MVGTGILALP WSISQLGWIV GPVAILAFPV ITYYYAMLLC DCYRTPDPIK GRRNRTYVDA VRAFLGKRNV VICGVLQYAA LWGTMIGYTI TTAISIASVK
101: RSICFHRHDA RCDVQGNIYM MAFGAMEIVL SQFPNLEKVT ILSVIATATS FIYSLVALGL SVAKLSTYHE LRGSTLVANV GEDIASLTKV WHVFQALGNI
201: AFAYTYSWLL LEIQDTLKSP PPENQVMKKV SLYTIAGTSI FYSSLGFIGY AAFGSHAPGN VLTGFGEPFW LVDIGHISVI IHLIGAYQVF GQVVFATNER
301: LLTSRCSTTS VFNRTCNIRF PGTRNGSFQF SLNRLLMRTI FVIFTTLVAM IFPFFNAILS ILGSISFWPI TVYFPMQMYM IQAKIEKGTP TWTVLYVLSF
401: VCLVVSLVAI VGSVADISQT LRHAKIFHIE L

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.