Factsheet for VIT_03s0038g02290.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 1
golgi 2
plasma membrane 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29279	Soybean	mitochondrion	84.57	84.41
KRH24299	Soybean	plasma membrane	83.59	83.43
GSMUA_Achr2P11300_001	Banana	plasma membrane	79.1	78.95
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.48	76.09
VIT_07s0031g02440.t01	Wine grape	plasma membrane	48.24	71.8
VIT_10s0116g01380.t01	Wine grape	plasma membrane	63.28	71.52
Os02t0102200-01	Rice	golgi, mitochondrion, peroxisome, plasma membrane	66.99	66.22
VIT_07s0031g02340.t01	Wine grape	peroxisome	70.7	64.3
VIT_19s0015g01300.t01	Wine grape	plasma membrane	50.98	56.99
VIT_18s0001g08270.t01	Wine grape	plasma membrane	51.76	54.87
VIT_04s0008g00240.t01	Wine grape	plasma membrane	50.59	54.41
VIT_19s0015g01290.t01	Wine grape	plasma membrane	49.02	53.18
VIT_04s0008g00230.t01	Wine grape	plasma membrane	49.02	52.84
VIT_04s0008g00280.t01	Wine grape	plasma membrane	48.63	51.98
VIT_18s0041g01270.t01	Wine grape	plasma membrane	43.16	48.57
VIT_18s0041g01240.t01	Wine grape	plasma membrane	38.28	45.48
VIT_18s0041g01250.t01	Wine grape	plasma membrane	37.5	43.94
VIT_04s0008g00250.t01	Wine grape	plasma membrane	48.83	42.37

Protein Annotations

EntrezGene:100262462	wikigene:100262462	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	ProteinID:CBI37884	ProteinID:CBI37884.3
UniProt:D7U565	EMBL:FN596508	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100262462	wikigene:LOC100262462	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF357
TMHMM:TMhelix	UniParc:UPI00015C9186	ArrayExpress:VIT_03s0038g02290	EnsemblPlantsGene:VIT_03s0038g02290	EnsemblPlants:VIT_03s0038g02290.t01	RefSeq:XP_002278086
RefSeq:XP_002278086.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:1565250..1567734

Molecular Weight (calculated)

56633.2 Da

IEP (calculated)

8.832

GRAVY (calculated)

0.392

Length

512 amino acids

Sequence
(BLAST)

001: MLPRSRTLPS RIYNGVVEER QDIRHYLQVE VQPKPHGESE AINPQANYSK CFDDDGRLKR TGTFWTASSH IITAVIGSGV LSLAWAIGQL GWVAGPIVMI
101: LFAFVNLYSS NLLAQCYRSG DPLTGQRNYT YMEAVKANLG GKKVLACGWI QYLNLFGTAI GYTIAASVSM MAIKRSNCFH KSGGKDPCHM SSNGYMITFG
201: IIEIIFSQIP DFDQVWWLSI VAAIMSFTYS SVGLGLGVAK VAENGSFKGS LTGISIGTVT HAGVVTSTQK LWRSLQALGA IAFAYSFSLI LIEIQDTIKS
301: PPAEYKTMRK ATVLSIAVTT AFYMLCGCFG YAAFGDLAPG NLLTGFGFYD PYWLLDIANI AIIVHLVGAY QVYCQPLFAF VEKWSAHKWP KSDFVTEEYD
401: LPIPCYGVYQ LNFFRLVWRT IFVVLTTLIA MLLPFFNDVV GILGAFGFWP LTVYFPVEMY ISQKKIGRWT SRWVALQILS FACLLISLAA AVGSVAGVVL
501: DLKTYKPFKT SY

Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)

001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY

Arabidopsis Description

AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.