Factsheet for VIT_04s0008g00240.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00230.t01	Wine grape	plasma membrane	76.47	76.63
VIT_04s0008g00280.t01	Wine grape	plasma membrane	71.22	70.77
VIT_07s0031g02440.t01	Wine grape	plasma membrane	41.39	57.27
GSMUA_Achr10P...	Banana	plasma membrane	53.78	56.26
TraesCS2D01G470100.1	Wheat	plasma membrane	48.32	55.16
KRH04869	Soybean	peroxisome, plasma membrane, vacuole	54.2	55.01
Os06t0556000-01	Rice	plasma membrane	56.09	54.83
VIT_04s0008g00250.t01	Wine grape	plasma membrane	67.02	54.07
Zm00001d046263_P001	Maize	peroxisome	54.2	53.09
TraesCS7B01G093200.1	Wheat	peroxisome	53.78	52.89
TraesCS7A01G188200.1	Wheat	peroxisome	53.78	52.89
KRH16264	Soybean	plasma membrane	52.31	52.75
TraesCS7D01G189000.1	Wheat	plasma membrane	53.99	52.66
HORVU7Hr1G088560.2	Barley	golgi, peroxisome, plasma membrane	53.99	52.45
VIT_18s0001g08270.t01	Wine grape	plasma membrane	53.15	52.38
TraesCS7D01G366200.1	Wheat	peroxisome	53.78	52.24
TraesCS7B01G271200.1	Wheat	peroxisome	53.78	52.24
HORVU7Hr1G038330.1	Barley	plasma membrane	53.99	52.24
TraesCS7A01G356600.1	Wheat	golgi, peroxisome, plasma membrane	53.99	52.24
TraesCS7D01G196100.1	Wheat	plasma membrane	51.89	52.22
TraesCS7A01G194500.1	Wheat	plasma membrane	51.89	52.22
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	52.73	52.18
TraesCS7B01G100100.1	Wheat	peroxisome	51.47	51.8
TraesCS2B01G493000.1	Wheat	plasma membrane	52.31	51.77
EER88513	Sorghum	peroxisome	53.15	51.53
Os06t0228600-01	Rice	peroxisome	52.31	51.45
TraesCS7D01G366000.1	Wheat	plasma membrane	49.16	51.43
TraesCS2A01G470200.1	Wheat	plasma membrane	27.52	51.37
KRH52796	Soybean	plasma membrane	50.63	51.28
KRH62110	Soybean	plasma membrane	50.63	51.17
KXG20176	Sorghum	plasma membrane	48.95	50.98
VIT_03s0038g02290.t01	Wine grape	golgi, mitochondrion, peroxisome, plasma membrane	54.41	50.59
Zm00001d046235_P002	Maize	plasma membrane	50.0	50.53
VIT_19s0015g01300.t01	Wine grape	plasma membrane	48.11	50.0
KRH52799	Soybean	plasma membrane	49.37	49.89
HORVU7Hr1G088510.2	Barley	plasma membrane	48.11	49.89
Zm00001d036984_P001	Maize	plasma membrane	48.74	49.47
KRH16269	Soybean	plasma membrane	47.69	49.35
OQU76565	Sorghum	plasma membrane	48.95	49.16
HORVU7Hr1G039670.2	Barley	mitochondrion, peroxisome	52.94	48.74
VIT_10s0116g01380.t01	Wine grape	plasma membrane	45.59	47.9
VIT_07s0031g02340.t01	Wine grape	peroxisome	53.99	45.65
VIT_19s0015g01290.t01	Wine grape	plasma membrane	44.75	45.13
VIT_18s0041g01270.t01	Wine grape	plasma membrane	41.6	43.52
TraesCS2D01G470800.1	Wheat	plasma membrane	33.19	42.02
VIT_18s0041g01240.t01	Wine grape	plasma membrane	37.6	41.53
VIT_18s0041g01250.t01	Wine grape	plasma membrane	36.55	39.82

Protein Annotations

EntrezGene:100264491	wikigene:100264491	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	EMBL:AM435015	ProteinID:CAN69378
ProteinID:CAN69378.1	ProteinID:CCB46518	ProteinID:CCB46518.1	UniProt:F6H362	EMBL:FN595231	GO:GO:0003333
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0015171	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100264491	wikigene:LOC100264491
PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF344	TMHMM:TMhelix	UniParc:UPI0001982E56	ArrayExpress:VIT_04s0008g00240
EnsemblPlantsGene:VIT_04s0008g00240	EnsemblPlants:VIT_04s0008g00240.t01	RefSeq:XP_002277844	RefSeq:XP_002277844.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:172218..174712

Molecular Weight (calculated)

52472.7 Da

IEP (calculated)

8.567

GRAVY (calculated)

0.422

Length

476 amino acids

Sequence
(BLAST)

001: MEEVDGQVIQ FVECESGLDI HKVVREDLDD DGRPKRTGTM WTASAHIITA VIGSGVLSLA WAVAQLGWVA GVASLLTYGC ITFYTSNLLA ECYRSPGTGK
101: RNYTYMEAVK DNLGGKMNFA CGMAQYANLN GLVVGYTVTA AISMVAIEKS NCFHRRGHEA SCEVSHKPYM IGLGLFEIVL SQIPNIEQVW WLSIMASIMS
201: FGYSSIGAGL AFAIMLSGHG KRTTVTGVEV GPGLTAARKM WRMFTALGDI AIAYSYSPVL IEVQDTLSSS KPEIKVMKKA NMISVAATTV FYMMCGCLGY
301: AAFGNSAPGN MLIGFGFYEP FWLIDLANIF IVLHLVGAYQ VMAQPVFCEV ESLCRRKWPK SEFVNREYPI KIGRRNLNFS INLFRLVWRT MYVVVATGLA
401: LALPFFNDLL ALIGAVSFWP LTVYFPITMY ISRKKINRAT IRWFMLQFVN LLSLLIALAA ACGSIEGLGE ALRIIK

Best Arabidopsis Sequence Match ( AT1G10010.2 )
(BLAST)

001: MMDAYNNPSA VESGDAAVKS VDDDGREKRT GTFWTASAHI ITAVIGSGVL SLAWAIAQLG WVAGTTVLVA FAIITYYTST LLADCYRSPD SITGTRNYNY
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.