Factsheet for VIT_18s0041g01250.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g01240.t01	Wine grape	plasma membrane	80.09	81.21
GSMUA_Achr8P08340_001	Banana	plasma membrane	56.06	53.15
VIT_18s0041g01270.t01	Wine grape	plasma membrane	54.69	52.53
VIT_07s0031g02440.t01	Wine grape	plasma membrane	35.01	44.48
VIT_19s0015g01300.t01	Wine grape	plasma membrane	45.77	43.67
VIT_18s0001g08270.t01	Wine grape	plasma membrane	47.6	43.06
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.54	41.37
VIT_19s0015g01290.t01	Wine grape	plasma membrane	42.79	39.62
VIT_10s0116g01380.t01	Wine grape	plasma membrane	40.96	39.51
VIT_04s0008g00230.t01	Wine grape	plasma membrane	41.88	38.53
VIT_03s0038g02290.t01	Wine grape	golgi, mitochondrion, peroxisome, plasma membrane	43.94	37.5
VIT_04s0008g00280.t01	Wine grape	plasma membrane	40.5	36.95
VIT_04s0008g00240.t01	Wine grape	plasma membrane	39.82	36.55
VIT_07s0031g02340.t01	Wine grape	peroxisome	44.39	34.46
VIT_04s0008g00250.t01	Wine grape	plasma membrane	42.11	31.19

Protein Annotations

EntrezGene:100265370	wikigene:100265370	MapMan:24.2.3.4.1	InterPro:AA_transpt_TM	ProteinID:CBI39292	ProteinID:CBI39292.3
UniProt:D7U978	EMBL:FN596744	GO:GO:0003333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015171	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100265370	wikigene:LOC100265370	PFAM:PF01490	PANTHER:PTHR22950	PANTHER:PTHR22950:SF274
TMHMM:TMhelix	UniParc:UPI00015C94A9	ArrayExpress:VIT_18s0041g01250	EnsemblPlantsGene:VIT_18s0041g01250	EnsemblPlants:VIT_18s0041g01250.t01	RefSeq:XP_002280161
RefSeq:XP_002280161.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:+:25886238..25888623

Molecular Weight (calculated)

48997.8 Da

IEP (calculated)

9.786

GRAVY (calculated)

0.652

Length

437 amino acids

Sequence
(BLAST)

001: MPHAFTSIVG SGILALPWTL AQLGWIVGPF VIVFFAAITY YFASLLCDCY RTPDQIKGKR NRTYMDAVRV FLGERNVLIC GILQYSALWG TMIGYTITTT
101: ISIATVKRSI CFHQHMSRCD VQGNVYMMAF GAMEIVLSQF PNLEKVTFLS VIATVTSFIY SLIALGLSIA KLSTTHKLKG TIMVAHVGKD IATSTKVWHV
201: FQALGNVAFA YTYAWLLLEI QDTLKSPPPE NKVMKKVSFY TILGTAIFYC SLGFIGYAAF GSDAPGNILT GFDEPVWLVD VGNIAVIIHL IGGYQVFGQV
301: IFATNERLLT SRLSTSFFNR TYTIRFSFIR NRSFHFSFSR LLMRTVFVIL TTLVAMIFPF FNAILSILGS ISFWPITVYF PMHMYMIQAK IKKGSPTWMV
401: FYVLSFVCLI VSLVSVIGSV ADISQNLRHA KIFHIEL

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.