Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0041g01250.t01 | Wine grape | plasma membrane | 53.15 | 56.06 |
| GSMUA_Achr9P08360_001 | Banana | plasma membrane | 55.1 | 54.86 |
| VIT_18s0041g01240.t01 | Wine grape | plasma membrane | 49.89 | 53.36 |
| GSMUA_Achr6P29090_001 | Banana | mitochondrion, plasma membrane | 54.88 | 51.21 |
| GSMUA_Achr10P... | Banana | plasma membrane | 44.9 | 49.64 |
| GSMUA_Achr3P02860_001 | Banana | peroxisome, plasma membrane, vacuole | 47.29 | 48.77 |
| GSMUA_Achr6P12890_001 | Banana | peroxisome, plasma membrane, vacuole | 51.19 | 48.66 |
| GSMUA_Achr2P20670_001 | Banana | plasma membrane | 46.2 | 48.3 |
| GSMUA_Achr4P32180_001 | Banana | plasma membrane | 49.89 | 47.82 |
| GSMUA_Achr10P... | Banana | plasma membrane | 46.64 | 47.25 |
| GSMUA_Achr1P28270_001 | Banana | peroxisome, plasma membrane, vacuole | 44.69 | 47.03 |
| GSMUA_Achr3P10920_001 | Banana | plasma membrane | 47.51 | 47.0 |
| GSMUA_Achr5P23910_001 | Banana | plasma membrane | 46.85 | 46.96 |
| GSMUA_Achr2P11300_001 | Banana | plasma membrane | 51.63 | 46.39 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, vacuole | 40.35 | 45.04 |
| GSMUA_Achr8P08250_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 46.64 | 43.09 |
| GSMUA_Achr8P32600_001 | Banana | plasma membrane | 49.46 | 41.68 |
| GSMUA_Achr5P01300_001 | Banana | extracellular, plasma membrane, plastid | 64.86 | 27.48 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P08340_001 | EnsemblPlants:GSMUA_Achr8T08340_001 | EnsemblPlantsGene:GSMUA_Achr8G08340_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF274 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000295127F | UniProt:M0TNN7 | MapMan:24.2.3.4.1 | : | : | : |
Description
Amino acid permease 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G08340_001]
Coordinates
chr8:+:5574901..5578589
Molecular Weight (calculated)
51179.5 Da
IEP (calculated)
9.341
GRAVY (calculated)
0.554
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMEESSEDG RVRTGTVWTA TAHVITAIVG SGVLTLPWSV AQLGWILGPV VLVFFAFITY FTATLLSDCY RLPDPMKGRR NHTYMDAIRA CLGRKDVLIC
101: GITQYSILWG TMVGYTITSV MSMMAIDLSM CFRNKGPNAS CEVSGTLYVV IFGAMEVLLS QFSSLEKVTV LSYVAAAMSF AYSSIGLCLC LLEFSSHPKS
201: KGTLTGVQVG IRNVSSTTKI WDSFQALGNV AFAYTFSMLL IEIQDTLKSP PSENGTMKKA SIYGIGSTTL FYISLGCLGY ATFGNDTPGN ILTGFRKPIW
301: LVDIANLAVL IHLFGAYQLF AQPIFAFYEQ WSAKKWLNAG FFQRVYTLNL PFSKSRSIKF TLCKLILRTL FVLITTVVAM MLPFFNAVVG LLGALGFWPL
401: TVYYPMSMYM NQAKIKRRQF KWVMLQVLSL VCLFVSLLAV IGSVADIIEH LKHAELFKIK L
101: GITQYSILWG TMVGYTITSV MSMMAIDLSM CFRNKGPNAS CEVSGTLYVV IFGAMEVLLS QFSSLEKVTV LSYVAAAMSF AYSSIGLCLC LLEFSSHPKS
201: KGTLTGVQVG IRNVSSTTKI WDSFQALGNV AFAYTFSMLL IEIQDTLKSP PSENGTMKKA SIYGIGSTTL FYISLGCLGY ATFGNDTPGN ILTGFRKPIW
301: LVDIANLAVL IHLFGAYQLF AQPIFAFYEQ WSAKKWLNAG FFQRVYTLNL PFSKSRSIKF TLCKLILRTL FVLITTVVAM MLPFFNAVVG LLGALGFWPL
401: TVYYPMSMYM NQAKIKRRQF KWVMLQVLSL VCLFVSLLAV IGSVADIIEH LKHAELFKIK L
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.