Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr4P10230_001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G63850.1 | GSMUA_Achr4P10230_001 | AT4G19030.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr2P20670_001 | Banana | plasma membrane | 87.02 | 88.21 |
GSMUA_Achr10P... | Banana | plasma membrane | 73.83 | 79.14 |
GSMUA_Achr6P12890_001 | Banana | peroxisome, plasma membrane, vacuole | 85.01 | 78.35 |
GSMUA_Achr1P28270_001 | Banana | peroxisome, plasma membrane, vacuole | 74.72 | 76.26 |
HORVU3Hr1G091110.1 | Barley | cytosol, vacuole | 18.79 | 71.19 |
GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, vacuole | 65.32 | 70.7 |
OQU78029 | Sorghum | cytosol, peroxisome, plasma membrane | 75.62 | 69.69 |
Zm00001d010231_P001 | Maize | plasma membrane | 74.5 | 69.67 |
TraesCS1D01G264700.1 | Wheat | golgi, peroxisome, vacuole | 76.06 | 69.39 |
TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 76.06 | 69.25 |
HORVU1Hr1G064970.10 | Barley | golgi, mitochondrion, peroxisome | 75.84 | 68.62 |
AT5G63850.1 | Thale cress | plasma membrane | 71.36 | 68.45 |
CDX88364 | Canola | plasma membrane | 72.71 | 68.28 |
Bra015673.1-P | Field mustard | plasma membrane | 72.48 | 68.07 |
CDX88365 | Canola | plasma membrane | 72.48 | 68.07 |
CDY43761 | Canola | plasma membrane | 70.92 | 68.03 |
TraesCS3A01G406800.1 | Wheat | plasma membrane | 70.92 | 67.88 |
Bra024241.1-P | Field mustard | plasma membrane | 70.69 | 67.81 |
Bra029199.1-P | Field mustard | plasma membrane | 70.69 | 67.81 |
CDY31348 | Canola | plasma membrane | 70.69 | 67.81 |
CDY39844 | Canola | plasma membrane | 70.69 | 67.81 |
CDX87522 | Canola | plasma membrane | 72.04 | 67.65 |
Zm00001d042619_P002 | Maize | plasma membrane | 74.72 | 67.61 |
AT1G77380.1 | Thale cress | plasma membrane | 71.81 | 67.44 |
EES03989 | Sorghum | plasma membrane | 74.05 | 67.41 |
CDX84450 | Canola | plasma membrane | 70.25 | 67.38 |
Os01t0882800-01 | Rice | plasma membrane | 73.38 | 67.21 |
Os05t0424000-01 | Rice | cytosol, plasma membrane, vacuole | 74.5 | 67.14 |
Os12t0181500-01 | Rice | plasma membrane | 71.14 | 66.95 |
Os12t0181600-01 | Rice | plasma membrane | 71.14 | 66.95 |
CDY21569 | Canola | plasma membrane | 72.48 | 66.8 |
HORVU3Hr1G091120.3 | Barley | plasma membrane | 71.59 | 66.67 |
Solyc06g060110.2.1 | Tomato | plasma membrane | 70.25 | 66.67 |
TraesCS3A01G406900.1 | Wheat | plasma membrane | 71.59 | 66.67 |
TraesCS3B01G441200.1 | Wheat | plasma membrane | 71.59 | 66.67 |
Bra009371.1-P | Field mustard | plasma membrane | 72.26 | 66.6 |
CDX69918 | Canola | plasma membrane | 72.26 | 66.6 |
Zm00001d053143_P002 | Maize | plasma membrane | 70.25 | 66.53 |
TraesCS3B01G441100.1 | Wheat | plasma membrane | 71.36 | 66.46 |
TraesCS3D01G402200.1 | Wheat | plasma membrane | 71.59 | 66.39 |
TraesCS3A01G407000.1 | Wheat | plasma membrane | 71.14 | 66.25 |
Os11t0195600-01 | Rice | cytosol, plasma membrane, vacuole | 70.47 | 66.18 |
PGSC0003DMT400030727 | Potato | plasma membrane | 70.02 | 66.17 |
CDX78353 | Canola | plasma membrane | 72.04 | 66.12 |
CDX81121 | Canola | plasma membrane | 72.04 | 66.12 |
VIT_18s0001g02020.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 71.14 | 66.11 |
Bra006016.1-P | Field mustard | plasma membrane | 71.81 | 65.91 |
EES16763 | Sorghum | plasma membrane | 70.92 | 65.9 |
AT5G09220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 72.48 | 65.72 |
Zm00001d023593_P001 | Maize | plasma membrane | 70.02 | 65.62 |
VIT_10s0116g01380.t01 | Wine grape | plasma membrane | 66.44 | 65.56 |
GSMUA_Achr8P08250_001 | Banana | cytosol, peroxisome, plasma membrane, plastid | 73.15 | 65.53 |
EES16764 | Sorghum | plasma membrane | 70.25 | 65.15 |
Zm00001d023603_P001 | Maize | plasma membrane | 53.91 | 65.14 |
EES08162 | Sorghum | plasma membrane | 70.02 | 65.07 |
EES16761 | Sorghum | plasma membrane | 69.57 | 65.06 |
HORVU5Hr1G037660.1 | Barley | plasma membrane | 69.57 | 64.93 |
TraesCS5A01G115100.1 | Wheat | plasma membrane | 69.57 | 64.93 |
TraesCS5D01G125700.1 | Wheat | plasma membrane | 69.57 | 64.93 |
TraesCS5B01G116100.1 | Wheat | plasma membrane | 69.35 | 64.72 |
TraesCS3D01G402300.1 | Wheat | plasma membrane | 71.36 | 64.71 |
EES15765 | Sorghum | plasma membrane | 69.13 | 64.51 |
PGSC0003DMT400015426 | Potato | plasma membrane | 68.9 | 64.3 |
Zm00001d023592_P001 | Maize | plasma membrane | 68.9 | 64.17 |
KRH53283 | Soybean | golgi, peroxisome, plasma membrane | 69.8 | 64.07 |
Zm00001d023596_P001 | Maize | cytosol, peroxisome, plasma membrane | 68.9 | 63.9 |
KRH17988 | Soybean | plasma membrane | 67.79 | 63.26 |
Solyc11g005070.1.1 | Tomato | plasma membrane | 67.34 | 63.24 |
KRH16402 | Soybean | plasma membrane | 67.56 | 63.05 |
KRH64623 | Soybean | cytosol, peroxisome, plasma membrane | 68.68 | 63.04 |
TraesCS4A01G215300.1 | Wheat | plasma membrane | 68.23 | 62.76 |
TraesCS4B01G100800.1 | Wheat | plasma membrane | 68.23 | 62.63 |
TraesCS4D01G097400.1 | Wheat | plasma membrane | 68.23 | 62.63 |
GSMUA_Achr8P32600_001 | Banana | plasma membrane | 76.51 | 62.52 |
HORVU4Hr1G043680.3 | Barley | plasma membrane | 67.79 | 62.09 |
CDY71454 | Canola | golgi, peroxisome, plasma membrane | 38.7 | 61.79 |
CDY36017 | Canola | plasma membrane | 66.44 | 61.75 |
Bra014020.1-P | Field mustard | plasma membrane | 66.22 | 61.54 |
KXG23123 | Sorghum | mitochondrion, plastid | 68.9 | 61.35 |
PGSC0003DMT400043280 | Potato | plasma membrane | 64.21 | 61.32 |
GSMUA_Achr2P11300_001 | Banana | plasma membrane | 70.25 | 61.21 |
EES08159 | Sorghum | cytosol, peroxisome, plasma membrane | 66.44 | 61.11 |
TraesCS1B01G275200.1 | Wheat | mitochondrion | 76.51 | 61.07 |
Zm00001d004705_P001 | Maize | plasma membrane | 61.97 | 61.01 |
Bra036939.1-P | Field mustard | plasma membrane | 64.43 | 60.5 |
CDY14972 | Canola | plasma membrane | 64.43 | 60.5 |
HORVU3Hr1G091020.2 | Barley | mitochondrion | 71.81 | 60.45 |
Zm00001d041842_P002 | Maize | mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 69.35 | 60.43 |
AT1G44100.1 | Thale cress | plasma membrane | 64.88 | 60.42 |
CDY47793 | Canola | plasma membrane | 64.21 | 60.29 |
Bra032199.1-P | Field mustard | plasma membrane | 65.55 | 60.16 |
CDY43854 | Canola | plasma membrane | 65.55 | 60.16 |
TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 71.36 | 60.08 |
TraesCS5B01G120000.1 | Wheat | plasma membrane | 63.09 | 59.87 |
HORVU3Hr1G091070.1 | Barley | cytosol | 61.3 | 59.83 |
CDY60629 | Canola | plasma membrane | 55.48 | 59.76 |
VIT_07s0031g02340.t01 | Wine grape | peroxisome | 75.17 | 59.68 |
TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.42 | 58.86 |
PGSC0003DMT400008650 | Potato | plasma membrane | 60.4 | 58.19 |
TraesCS5D01G129000.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.51 | 57.7 |
HORVU2Hr1G084780.1 | Barley | extracellular | 29.08 | 56.77 |
KXG23106 | Sorghum | cytosol, peroxisome, plasma membrane | 59.51 | 55.19 |
Zm00001d050211_P001 | Maize | peroxisome | 55.26 | 54.41 |
EES13588 | Sorghum | cytosol, peroxisome, plasma membrane | 59.51 | 53.41 |
TraesCS3A01G065600.1 | Wheat | plasma membrane | 54.59 | 53.04 |
GSMUA_Achr10P... | Banana | plasma membrane | 53.69 | 52.75 |
GSMUA_Achr4P32180_001 | Banana | plasma membrane | 55.7 | 51.77 |
TraesCS2B01G367000.1 | Wheat | plasma membrane | 57.27 | 51.72 |
GSMUA_Achr5P23910_001 | Banana | plasma membrane | 52.35 | 50.87 |
TraesCS7D01G388300.1 | Wheat | plasma membrane | 59.06 | 50.09 |
GSMUA_Achr3P10920_001 | Banana | plasma membrane | 51.01 | 48.93 |
TraesCS2D01G346500.1 | Wheat | plasma membrane | 53.69 | 47.81 |
GSMUA_Achr9P08360_001 | Banana | plasma membrane | 49.44 | 47.73 |
GSMUA_Achr8P08340_001 | Banana | plasma membrane | 48.77 | 47.29 |
HORVU2Hr1G084710.1 | Barley | plasma membrane | 38.93 | 46.65 |
GSMUA_Achr6P29090_001 | Banana | mitochondrion, plasma membrane | 50.11 | 45.34 |
Os12t0195100-00 | Rice | plastid | 43.85 | 39.52 |
TraesCS2D01G347000.2 | Wheat | cytosol, plasma membrane, vacuole | 41.61 | 35.91 |
TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 40.94 | 35.6 |
GSMUA_Achr5P01300_001 | Banana | extracellular, plasma membrane, plastid | 48.99 | 20.13 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P02860_001 | EnsemblPlants:GSMUA_Achr3T02860_001 | EnsemblPlantsGene:GSMUA_Achr3G02860_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF295 | PFAM:PF01490 | TMHMM:TMhelix | UniParc:UPI0002963A2A |
UniProt:M0SBA4 | MapMan:24.2.3.4.1 | : | : | : | : |
Description
Amino acid permease 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G02860_001]
Coordinates
chr3:-:1864081..1865983
Molecular Weight (calculated)
48796.7 Da
IEP (calculated)
8.513
GRAVY (calculated)
0.535
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENGGANCY QQLAFTPASV SVEVSHAHKL QEAFECYDDD GRAKRTGTLW TASAHIVTAV IGSGVLSLAW AIAQLGWVAG PVVMLLFSFV THYTSTLLAD
101: CYRSGDPIAG KRNYSYTDAV HAYLGGLKVK LCGFIQYANL FGVAIGYTIA SSISMMAIKR SNCFHERGHE NPCHASSNPY MIMFGIAEIF LSQIPDFDQI
201: WWLSIVAAVM SFTYSSIGLA LGIVQVIANK GFKGSLTGIS IGAVSPTQKI WRSLQALGDI AFAYSFSLIL IEIQDTIKAP PPSEAKVMKK ASVVSIAVTT
301: FFYMLCGCMG YAAFGDGAPG NLLTGFGFYN PYWLLDIANA AIRFRLSLFR LVWRSTFVVL TTVISMLLPF FNDVVALLGA LGFWPLTVYF PVEMYIVQKR
401: IPRWSLRWVC LQMLSLGCLV ITIAAAVGSV AGIFTDLKVY HPFKTTS
101: CYRSGDPIAG KRNYSYTDAV HAYLGGLKVK LCGFIQYANL FGVAIGYTIA SSISMMAIKR SNCFHERGHE NPCHASSNPY MIMFGIAEIF LSQIPDFDQI
201: WWLSIVAAVM SFTYSSIGLA LGIVQVIANK GFKGSLTGIS IGAVSPTQKI WRSLQALGDI AFAYSFSLIL IEIQDTIKAP PPSEAKVMKK ASVVSIAVTT
301: FFYMLCGCMG YAAFGDGAPG NLLTGFGFYN PYWLLDIANA AIRFRLSLFR LVWRSTFVVL TTVISMLLPF FNDVVALLGA LGFWPLTVYF PVEMYIVQKR
401: IPRWSLRWVC LQMLSLGCLV ITIAAAVGSV AGIFTDLKVY HPFKTTS
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.