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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G120000.1 Wheat plasma membrane 75.31 77.07
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 75.73 77.0
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 71.78 75.05
EES16761 Sorghum plasma membrane 70.12 70.71
EES15765 Sorghum plasma membrane 69.92 70.35
EES16764 Sorghum plasma membrane 70.12 70.12
EES16763 Sorghum plasma membrane 69.5 69.65
EES08162 Sorghum plasma membrane 68.05 68.19
EES08159 Sorghum cytosol, peroxisome, plasma membrane 68.05 67.49
KXG23123 Sorghum mitochondrion, plastid 69.71 66.93
GSMUA_Achr10P... Banana plasma membrane 53.11 61.39
Solyc06g060110.2.1 Tomato plasma membrane 59.96 61.36
GSMUA_Achr2P20670_001 Banana plasma membrane 55.6 60.77
PGSC0003DMT400030727 Potato plasma membrane 59.54 60.68
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 60.79 60.41
CDY31348 Canola plasma membrane 57.68 59.66
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 55.19 59.51
EES03989 Sorghum plasma membrane 60.58 59.47
EES13588 Sorghum cytosol, peroxisome, plasma membrane 61.2 59.24
Bra029199.1-P Field mustard plasma membrane 57.26 59.23
CDY39844 Canola plasma membrane 57.26 59.23
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 59.54 59.18
Bra015673.1-P Field mustard plasma membrane 58.3 59.03
AT5G63850.1 Thale cress plasma membrane 57.05 59.01
Bra024241.1-P Field mustard plasma membrane 57.05 59.01
CDX88364 Canola plasma membrane 58.09 58.82
CDY43761 Canola plasma membrane 56.85 58.8
CDX84450 Canola plasma membrane 56.64 58.58
CDX87522 Canola plasma membrane 57.68 58.4
CDX88365 Canola plasma membrane 57.68 58.4
PGSC0003DMT400015426 Potato plasma membrane 57.68 58.04
CDX69918 Canola plasma membrane 58.3 57.94
CDX78353 Canola plasma membrane 58.51 57.91
AT1G77380.1 Thale cress plasma membrane 57.05 57.77
Bra009371.1-P Field mustard plasma membrane 58.09 57.73
CDY21569 Canola plasma membrane 58.09 57.73
CDX81121 Canola plasma membrane 58.3 57.7
Bra006016.1-P Field mustard plasma membrane 58.3 57.7
KRH16402 Soybean plasma membrane 57.05 57.41
PGSC0003DMT400043280 Potato plasma membrane 55.6 57.27
KRH17988 Soybean plasma membrane 56.64 56.99
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 58.09 56.8
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 56.64 56.76
KRH53283 Soybean golgi, peroxisome, plasma membrane 57.26 56.67
Solyc11g005070.1.1 Tomato plasma membrane 55.81 56.51
VIT_10s0116g01380.t01 Wine grape plasma membrane 52.7 56.07
CDY36017 Canola plasma membrane 55.39 55.51
KRH64623 Soybean cytosol, peroxisome, plasma membrane 56.02 55.44
Bra014020.1-P Field mustard plasma membrane 55.19 55.3
AT1G44100.1 Thale cress plasma membrane 54.77 55.0
Bra032199.1-P Field mustard plasma membrane 54.98 54.41
CDY43854 Canola plasma membrane 54.98 54.41
CDY71454 Canola golgi, peroxisome, plasma membrane 31.54 54.29
CDY60629 Canola plasma membrane 46.47 53.98
PGSC0003DMT400008650 Potato plasma membrane 51.87 53.88
CDY47793 Canola plasma membrane 52.9 53.57
EER97947 Sorghum golgi, peroxisome, plasma membrane 53.32 53.54
CDY14972 Canola plasma membrane 52.49 53.15
Bra036939.1-P Field mustard plasma membrane 52.49 53.15
OQU76565 Sorghum plasma membrane 51.45 52.32
EER88513 Sorghum peroxisome 52.9 51.93
KXG20176 Sorghum plasma membrane 49.17 51.86
VIT_07s0031g02340.t01 Wine grape peroxisome 59.75 51.15
KXG33808 Sorghum plasma membrane 49.17 50.43
Os12t0195100-00 Rice plastid 51.45 50.0
KXG26523 Sorghum plasma membrane 47.1 49.35
OQU87977 Sorghum plasma membrane 47.1 48.71
EES15803 Sorghum plasma membrane 46.47 46.57
EES11591 Sorghum plasma membrane 45.85 46.43
EES07345 Sorghum golgi, peroxisome, plasma membrane 44.61 45.74
Protein Annotations
EnsemblPlants:KXG23106EnsemblPlantsGene:SORBI_3008G057200GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF466PFAM:PF01490ProteinID:KXG23106ProteinID:KXG23106.1SEG:seg
TMHMM:TMhelixUniParc:UPI00081ADC1DUniProt:A0A1B6PBP3MapMan:24.2.3.4.1::
Description
hypothetical protein
Coordinates
chr8:-:5936826..5938274
Molecular Weight (calculated)
51023.7 Da
IEP (calculated)
8.243
GRAVY (calculated)
0.546
Length
482 amino acids
Sequence
(BLAST)
001: MVQIKPTEVS LEAGNLAEHS AELDDDGRPR RTGTVLTASA HIITSVIGSG VLSLPWAVAQ LGWAAGPPVL LVFGGATYYT STLLAECYRA GGGSDNPDAT
101: GARGRRNYSY MEAVRAILGG WKVTFCGVIQ YANLAAVAVG YTIAASISMQ AVWRANCFHA RGHDDACRSS SVPYMIAFGA TQIVFSQIPG FHQIEWLSIV
201: ASVMSFTYSG IGIGLAVAQT VANGGFRGTL TGVAVGGASG VTVMHKVWST MQALGNIAFA YSFSNVLIEI QDTIKAPPPS ETAVMNKATA LSIATTTAFY
301: ALCGCMGYAA FGNAAPDNLL TGFGFYEPFW LVDVANAAIV VHLVGAYQVF CQPIYAFVES RAAAAWPESA FISKELRLGP FVPSALRLVW RSAFVCLATV
401: VAMALPFFGS VVGLIGAFTF WPLTVYFPVE MYIKQRAVTR RSAQWICLKA LAAVCLVVSV VATAGSIASF VGAFRDFRPF SG
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.