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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 Bra012567.1-P AT4G19030.1 21798944
AT5G63850.1 Bra013361.1-P AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43761 Canola plasma membrane 99.79 99.79
Bra029199.1-P Field mustard plasma membrane 94.21 94.21
AT5G63850.1 Thale cress plasma membrane 92.49 92.49
Bra006016.1-P Field mustard plasma membrane 85.41 81.72
Bra009371.1-P Field mustard plasma membrane 84.76 81.44
GSMUA_Achr10P... Banana plasma membrane 64.16 71.7
Bra015673.1-P Field mustard plasma membrane 72.75 71.22
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 67.81 70.69
GSMUA_Achr2P20670_001 Banana plasma membrane 66.09 69.84
VIT_10s0116g01380.t01 Wine grape plasma membrane 67.81 69.76
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 71.46 68.66
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 60.73 68.52
TraesCS3A01G406800.1 Wheat plasma membrane 68.67 68.52
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 69.53 66.8
Zm00001d010231_P001 Maize plasma membrane 68.24 66.53
TraesCS3A01G406900.1 Wheat plasma membrane 68.45 66.46
EES03989 Sorghum plasma membrane 69.96 66.4
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 67.81 66.39
HORVU3Hr1G091120.3 Barley plasma membrane 68.24 66.25
Zm00001d023593_P001 Maize plasma membrane 67.81 66.25
Os01t0882800-01 Rice plasma membrane 69.31 66.19
TraesCS3D01G402200.1 Wheat plasma membrane 68.45 66.18
Zm00001d053143_P002 Maize plasma membrane 66.95 66.1
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 62.02 65.98
EES16764 Sorghum plasma membrane 68.24 65.98
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 68.24 65.98
EES15765 Sorghum plasma membrane 67.81 65.97
TraesCS3B01G441100.1 Wheat plasma membrane 67.81 65.83
TraesCS3B01G441200.1 Wheat plasma membrane 67.81 65.83
TraesCS3A01G407000.1 Wheat plasma membrane 67.6 65.62
Zm00001d023592_P001 Maize plasma membrane 67.6 65.62
TraesCS5B01G116100.1 Wheat plasma membrane 67.38 65.55
EES16763 Sorghum plasma membrane 67.6 65.49
TraesCS5A01G115100.1 Wheat plasma membrane 67.17 65.34
TraesCS5D01G125700.1 Wheat plasma membrane 67.17 65.34
EES16761 Sorghum plasma membrane 66.95 65.27
Zm00001d042619_P002 Maize plasma membrane 69.1 65.18
HORVU5Hr1G037660.1 Barley plasma membrane 66.95 65.14
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 68.24 64.9
Zm00001d023603_P001 Maize plasma membrane 51.5 64.86
Os12t0181500-01 Rice plasma membrane 66.09 64.84
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 68.24 64.77
TraesCS4B01G100800.1 Wheat plasma membrane 67.6 64.68
EES08162 Sorghum plasma membrane 66.74 64.66
Os12t0181600-01 Rice plasma membrane 65.88 64.63
TraesCS4A01G215300.1 Wheat plasma membrane 67.38 64.61
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 68.45 64.57
HORVU4Hr1G043680.3 Barley plasma membrane 67.6 64.55
TraesCS4D01G097400.1 Wheat plasma membrane 67.38 64.48
TraesCS3D01G402300.1 Wheat plasma membrane 68.03 64.3
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 68.03 63.91
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 68.24 63.73
Bra032199.1-P Field mustard plasma membrane 65.45 62.63
Bra014020.1-P Field mustard plasma membrane 63.95 61.95
HORVU3Hr1G091110.1 Barley cytosol, vacuole 15.67 61.86
KXG23123 Sorghum mitochondrion, plastid 66.52 61.75
VIT_07s0031g02340.t01 Wine grape peroxisome 74.46 61.63
Bra036939.1-P Field mustard plasma membrane 62.66 61.34
Zm00001d004705_P001 Maize plasma membrane 59.66 61.23
EES08159 Sorghum cytosol, peroxisome, plasma membrane 63.52 60.91
TraesCS5B01G120000.1 Wheat plasma membrane 61.37 60.72
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 61.59 60.55
HORVU3Hr1G091070.1 Barley cytosol 59.44 60.48
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 68.88 60.45
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 66.31 60.23
HORVU3Hr1G091020.2 Barley mitochondrion 68.45 60.08
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 58.8 59.44
GSMUA_Achr8P32600_001 Banana plasma membrane 68.88 58.68
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 59.01 57.05
TraesCS1B01G275200.1 Wheat mitochondrion 68.24 56.79
Zm00001d050211_P001 Maize peroxisome 54.72 56.17
Bra039735.1-P Field mustard plasma membrane 56.01 55.53
HORVU2Hr1G084780.1 Barley extracellular 27.25 55.46
EES13588 Sorghum cytosol, peroxisome, plasma membrane 57.73 54.02
TraesCS2B01G367000.1 Wheat plasma membrane 56.87 53.54
Bra019967.1-P Field mustard plasma membrane 43.56 53.0
TraesCS3A01G065600.1 Wheat plasma membrane 52.15 52.83
Bra031696.1-P Field mustard plasma membrane 32.19 52.82
Bra031695.1-P Field mustard plasma membrane 52.58 52.69
Bra027868.1-P Field mustard cytosol, peroxisome, plasma membrane 54.08 52.61
Bra035446.1-P Field mustard cytosol, peroxisome, plasma membrane 55.58 51.08
Bra019969.1-P Field mustard plasma membrane 48.07 50.91
TraesCS7D01G388300.1 Wheat plasma membrane 57.3 50.66
Bra031697.1-P Field mustard plasma membrane 51.93 50.42
TraesCS2D01G346500.1 Wheat plasma membrane 53.86 50.0
HORVU2Hr1G084710.1 Barley plasma membrane 39.91 49.87
Bra017905.1-P Field mustard peroxisome 54.94 47.23
Bra026481.1-P Field mustard plasma membrane 46.78 46.68
Os12t0195100-00 Rice plastid 43.78 41.13
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 39.48 35.52
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 39.06 35.41
Bra019968.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 39.27 35.06
Protein Annotations
EnsemblPlants:Bra024241.1EnsemblPlants:Bra024241.1-PEnsemblPlantsGene:Bra024241GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF474PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI000253F32AUniProt:M4E637MapMan:24.2.3.4.1:::
Description
AT5G63850 (E=6e-250) AAP4 | AAP4; acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter/ primary active transmembrane transporter
Coordinates
chrA06:+:14489002..14491389
Molecular Weight (calculated)
51358.1 Da
IEP (calculated)
9.137
GRAVY (calculated)
0.489
Length
466 amino acids
Sequence
(BLAST)
001: MDVPRPAFKC FDDDGRPKRS GTVWTASAHI LTAVIGSGVL SLAWAIAQLG WIAGPAVMFL FSFVTYYSTT LLSDCYRTGD PVSGKRNYTY MDAVQSILGG
101: FRFKICGLMQ FLNLFGTTIG YTIASSISMM AIKRSNCFHE SGGKNPCHMS SNPYMIMFGV TEILLSTIKD FHQIWWLSTV AAIMSFTYSS IGLALGIIQV
201: AANGVFKGSL TGISIGAVTQ TQKIWRTFQA LGDIAFAYSY SVVLIEIQDT VRSPPAESKT MKNATRISIA VTTTFYMLCG CMGYAAFGDA APGNLLTGFG
301: FYNPFWLLDV ANAAIVVHLV GAYQVFAQPI FAFVEKQAAA RFPDSDLVSK EFEIRFPGVR SPYKVNVFRT VFRSCFVVLT TVISMLMPFF NDVVGILGAL
401: AFWPLTVYFP VEMYIKQRKV ERWSMKWVCL QMLSCGCLVV TVVAGVGSVV GVMLDLKVYK PFKTTY
Best Arabidopsis Sequence Match ( AT5G63850.1 )
(BLAST)
001: MDVPRPAFKC FDDDGRLKRS GTVWTASAHI ITAVIGSGVL SLAWAIGQLG WIAGPTVMLL FSFVTYYSST LLSDCYRTGD PVSGKRNYTY MDAVRSILGG
101: FRFKICGLIQ YLNLFGITVG YTIAASISMM AIKRSNCFHE SGGKNPCHMS SNPYMIMFGV TEILLSQIKD FDQIWWLSIV AAIMSFTYSA IGLALGIIQV
201: AANGVVKGSL TGISIGAVTQ TQKIWRTFQA LGDIAFAYSY SVVLIEIQDT VRSPPAESKT MKIATRISIA VTTTFYMLCG CMGYAAFGDK APGNLLTGFG
301: FYNPFWLLDV ANAAIVIHLV GAYQVFAQPI FAFIEKQAAA RFPDSDLVTK EYEIRIPGFR SPYKVNVFRA VYRSGFVVLT TVISMLMPFF NDVVGILGAL
401: GFWPLTVYFP VEMYIRQRKV ERWSMKWVCL QMLSCGCLMI TLVAGVGSIA GVMLDLKVYK PFKTTY
Arabidopsis Description
AAP4AAP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UDW1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.