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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • peroxisome 1
  • plasma membrane 2
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G091110.1 Barley cytosol, vacuole 24.58 100.0
TraesCS3A01G406900.1 Wheat plasma membrane 98.33 98.33
TraesCS3D01G402200.1 Wheat plasma membrane 98.33 97.93
TraesCS3B01G441100.1 Wheat plasma membrane 97.92 97.92
TraesCS3A01G406800.1 Wheat plasma membrane 95.0 97.64
TraesCS3A01G407000.1 Wheat plasma membrane 97.5 97.5
TraesCS3B01G441200.1 Wheat plasma membrane 97.29 97.29
TraesCS3D01G402300.1 Wheat plasma membrane 98.33 95.74
HORVU3Hr1G091020.2 Barley mitochondrion 99.58 90.02
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 97.71 88.32
HORVU3Hr1G091070.1 Barley cytosol 83.75 87.77
EES03989 Sorghum plasma membrane 89.17 87.17
Zm00001d042619_P002 Maize plasma membrane 88.12 85.63
Os01t0882800-01 Rice plasma membrane 86.25 84.84
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 82.71 80.36
TraesCS7D01G388300.1 Wheat plasma membrane 81.04 73.81
GSMUA_Achr10P... Banana plasma membrane 63.12 72.66
Solyc06g060110.2.1 Tomato plasma membrane 71.04 72.4
PGSC0003DMT400030727 Potato plasma membrane 71.25 72.3
HORVU5Hr1G037660.1 Barley plasma membrane 71.67 71.82
GSMUA_Achr2P20670_001 Banana plasma membrane 65.83 71.66
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 66.67 71.59
HORVU4Hr1G043680.3 Barley plasma membrane 72.71 71.52
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 71.67 70.93
AT1G77380.1 Thale cress plasma membrane 69.58 70.17
Bra015673.1-P Field mustard plasma membrane 69.38 69.96
CDX87522 Canola plasma membrane 69.17 69.75
AT5G63850.1 Thale cress plasma membrane 67.71 69.74
CDX88364 Canola plasma membrane 68.96 69.54
CDY39844 Canola plasma membrane 67.29 69.31
CDY31348 Canola plasma membrane 67.29 69.31
CDX88365 Canola plasma membrane 68.54 69.12
Bra029199.1-P Field mustard plasma membrane 67.08 69.1
VIT_10s0116g01380.t01 Wine grape plasma membrane 65.0 68.87
PGSC0003DMT400015426 Potato plasma membrane 68.54 68.68
CDY43761 Canola plasma membrane 66.46 68.45
CDX69918 Canola plasma membrane 68.96 68.25
CDY21569 Canola plasma membrane 68.96 68.25
Bra024241.1-P Field mustard plasma membrane 66.25 68.24
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 70.0 68.15
Bra009371.1-P Field mustard plasma membrane 68.75 68.04
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 68.12 67.98
CDX78353 Canola plasma membrane 68.96 67.97
CDX84450 Canola plasma membrane 65.83 67.81
CDX81121 Canola plasma membrane 68.75 67.76
Bra006016.1-P Field mustard plasma membrane 68.75 67.76
Solyc11g005070.1.1 Tomato plasma membrane 67.08 67.65
KRH17988 Soybean plasma membrane 66.46 66.6
PGSC0003DMT400043280 Potato plasma membrane 64.79 66.45
KRH16402 Soybean plasma membrane 65.83 65.97
KRH53283 Soybean golgi, peroxisome, plasma membrane 66.67 65.71
KRH64623 Soybean cytosol, peroxisome, plasma membrane 66.46 65.5
CDY60629 Canola plasma membrane 56.46 65.3
AT1G44100.1 Thale cress plasma membrane 64.38 64.38
CDY36017 Canola plasma membrane 64.38 64.24
Bra032199.1-P Field mustard plasma membrane 65.0 64.07
CDY43854 Canola plasma membrane 65.0 64.07
Bra014020.1-P Field mustard plasma membrane 64.17 64.03
CDY47793 Canola plasma membrane 62.92 63.45
Bra036939.1-P Field mustard plasma membrane 62.71 63.24
CDY14972 Canola plasma membrane 62.71 63.24
PGSC0003DMT400008650 Potato plasma membrane 60.62 62.72
HORVU2Hr1G084780.1 Barley extracellular 29.38 61.57
CDY71454 Canola golgi, peroxisome, plasma membrane 35.83 61.43
VIT_07s0031g02340.t01 Wine grape peroxisome 71.67 61.1
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 59.58 58.37
HORVU7Hr1G038330.1 Barley plasma membrane 57.5 56.1
HORVU2Hr1G061190.4 Barley plasma membrane 56.67 56.08
HORVU7Hr1G088510.2 Barley plasma membrane 52.08 54.47
HORVU2Hr1G084710.1 Barley plasma membrane 41.67 53.62
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 56.46 52.42
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 50.62 52.26
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 47.08 48.39
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 46.88 48.18
HORVU2Hr1G111140.3 Barley golgi 46.04 44.56
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 46.67 42.67
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 39.38 35.86
Protein Annotations
EMBL:AK372223EnsemblPlants:HORVU3Hr1G091120.3EnsemblPlantsGene:HORVU3Hr1G091120GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF295PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002007F23UniProt:F2E7U9MapMan:24.2.3.4.1:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E7U9]
Coordinates
chrchr3H:-:634579672..634581773
Molecular Weight (calculated)
51999.7 Da
IEP (calculated)
8.564
GRAVY (calculated)
0.515
Length
480 amino acids
Sequence
(BLAST)
001: MADKVVATYY YPPMEVAAAE LGQIAGSKLD DDGRNKRTGT MWTASSHIIT AVIGSGVLSL GWAIAQLGWV AGPAVMLLFS LVTYFTSSLL ADCYRSGDQS
101: TGKRNYTYMD AVNANLSGIK VQICGVLQYA NIVGVAIGYT IAASISMLAI KRANCFHGNG HADPCKVSSV PYMIIFGVAQ VFFSQIPDFD QISWLSMLAA
201: AMSFTYSSIG LGLGIVQVIA NGGMKGSLTG ISIGTVTPMQ KVWRSLQAFG DIAFAYSYSL ILIEIQDTIR APPPSESTVM KRATMVSVAV TTVFYMLCGC
301: MGYAAFGDAA PGNLLTGFGF YEPFWLLDVA NAAIVVHLVG AYQVYCQPLF AFVEKWAAKR WPESTFVTGE VEVPLFRTYK VNMFRATWRT AFVVATTVVS
401: MMLPFFNDVV GFLGALGFWP LTVYFPVEMY VVQKKVPKWS TRWVCLQMLS VGCLAISLAA AAGSIAGIKS DLKVYHPFKS
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.