Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU7Hr1G088900.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G63850.1 | HORVU7Hr1G088900.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU3Hr1G091110.1 | Barley | cytosol, vacuole | 24.58 | 100.0 |
TraesCS3A01G406900.1 | Wheat | plasma membrane | 98.33 | 98.33 |
TraesCS3D01G402200.1 | Wheat | plasma membrane | 98.33 | 97.93 |
TraesCS3B01G441100.1 | Wheat | plasma membrane | 97.92 | 97.92 |
TraesCS3A01G406800.1 | Wheat | plasma membrane | 95.0 | 97.64 |
TraesCS3A01G407000.1 | Wheat | plasma membrane | 97.5 | 97.5 |
TraesCS3B01G441200.1 | Wheat | plasma membrane | 97.29 | 97.29 |
TraesCS3D01G402300.1 | Wheat | plasma membrane | 98.33 | 95.74 |
HORVU3Hr1G091020.2 | Barley | mitochondrion | 99.58 | 90.02 |
TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 97.71 | 88.32 |
HORVU3Hr1G091070.1 | Barley | cytosol | 83.75 | 87.77 |
EES03989 | Sorghum | plasma membrane | 89.17 | 87.17 |
Zm00001d042619_P002 | Maize | plasma membrane | 88.12 | 85.63 |
Os01t0882800-01 | Rice | plasma membrane | 86.25 | 84.84 |
HORVU1Hr1G064970.10 | Barley | golgi, mitochondrion, peroxisome | 82.71 | 80.36 |
TraesCS7D01G388300.1 | Wheat | plasma membrane | 81.04 | 73.81 |
GSMUA_Achr10P... | Banana | plasma membrane | 63.12 | 72.66 |
Solyc06g060110.2.1 | Tomato | plasma membrane | 71.04 | 72.4 |
PGSC0003DMT400030727 | Potato | plasma membrane | 71.25 | 72.3 |
HORVU5Hr1G037660.1 | Barley | plasma membrane | 71.67 | 71.82 |
GSMUA_Achr2P20670_001 | Banana | plasma membrane | 65.83 | 71.66 |
GSMUA_Achr3P02860_001 | Banana | peroxisome, plasma membrane, vacuole | 66.67 | 71.59 |
HORVU4Hr1G043680.3 | Barley | plasma membrane | 72.71 | 71.52 |
GSMUA_Achr6P12890_001 | Banana | peroxisome, plasma membrane, vacuole | 71.67 | 70.93 |
AT1G77380.1 | Thale cress | plasma membrane | 69.58 | 70.17 |
Bra015673.1-P | Field mustard | plasma membrane | 69.38 | 69.96 |
CDX87522 | Canola | plasma membrane | 69.17 | 69.75 |
AT5G63850.1 | Thale cress | plasma membrane | 67.71 | 69.74 |
CDX88364 | Canola | plasma membrane | 68.96 | 69.54 |
CDY39844 | Canola | plasma membrane | 67.29 | 69.31 |
CDY31348 | Canola | plasma membrane | 67.29 | 69.31 |
CDX88365 | Canola | plasma membrane | 68.54 | 69.12 |
Bra029199.1-P | Field mustard | plasma membrane | 67.08 | 69.1 |
VIT_10s0116g01380.t01 | Wine grape | plasma membrane | 65.0 | 68.87 |
PGSC0003DMT400015426 | Potato | plasma membrane | 68.54 | 68.68 |
CDY43761 | Canola | plasma membrane | 66.46 | 68.45 |
CDX69918 | Canola | plasma membrane | 68.96 | 68.25 |
CDY21569 | Canola | plasma membrane | 68.96 | 68.25 |
Bra024241.1-P | Field mustard | plasma membrane | 66.25 | 68.24 |
AT5G09220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 70.0 | 68.15 |
Bra009371.1-P | Field mustard | plasma membrane | 68.75 | 68.04 |
VIT_18s0001g02020.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.12 | 67.98 |
CDX78353 | Canola | plasma membrane | 68.96 | 67.97 |
CDX84450 | Canola | plasma membrane | 65.83 | 67.81 |
CDX81121 | Canola | plasma membrane | 68.75 | 67.76 |
Bra006016.1-P | Field mustard | plasma membrane | 68.75 | 67.76 |
Solyc11g005070.1.1 | Tomato | plasma membrane | 67.08 | 67.65 |
KRH17988 | Soybean | plasma membrane | 66.46 | 66.6 |
PGSC0003DMT400043280 | Potato | plasma membrane | 64.79 | 66.45 |
KRH16402 | Soybean | plasma membrane | 65.83 | 65.97 |
KRH53283 | Soybean | golgi, peroxisome, plasma membrane | 66.67 | 65.71 |
KRH64623 | Soybean | cytosol, peroxisome, plasma membrane | 66.46 | 65.5 |
CDY60629 | Canola | plasma membrane | 56.46 | 65.3 |
AT1G44100.1 | Thale cress | plasma membrane | 64.38 | 64.38 |
CDY36017 | Canola | plasma membrane | 64.38 | 64.24 |
Bra032199.1-P | Field mustard | plasma membrane | 65.0 | 64.07 |
CDY43854 | Canola | plasma membrane | 65.0 | 64.07 |
Bra014020.1-P | Field mustard | plasma membrane | 64.17 | 64.03 |
CDY47793 | Canola | plasma membrane | 62.92 | 63.45 |
Bra036939.1-P | Field mustard | plasma membrane | 62.71 | 63.24 |
CDY14972 | Canola | plasma membrane | 62.71 | 63.24 |
PGSC0003DMT400008650 | Potato | plasma membrane | 60.62 | 62.72 |
HORVU2Hr1G084780.1 | Barley | extracellular | 29.38 | 61.57 |
CDY71454 | Canola | golgi, peroxisome, plasma membrane | 35.83 | 61.43 |
VIT_07s0031g02340.t01 | Wine grape | peroxisome | 71.67 | 61.1 |
HORVU7Hr1G088560.2 | Barley | golgi, peroxisome, plasma membrane | 59.58 | 58.37 |
HORVU7Hr1G038330.1 | Barley | plasma membrane | 57.5 | 56.1 |
HORVU2Hr1G061190.4 | Barley | plasma membrane | 56.67 | 56.08 |
HORVU7Hr1G088510.2 | Barley | plasma membrane | 52.08 | 54.47 |
HORVU2Hr1G084710.1 | Barley | plasma membrane | 41.67 | 53.62 |
HORVU7Hr1G039670.2 | Barley | mitochondrion, peroxisome | 56.46 | 52.42 |
HORVU2Hr1G081790.1 | Barley | cytosol, peroxisome, plasma membrane | 50.62 | 52.26 |
HORVU6Hr1G071840.3 | Barley | endoplasmic reticulum, golgi, plasma membrane | 47.08 | 48.39 |
HORVU5Hr1G029060.1 | Barley | cytosol, peroxisome, plasma membrane | 46.88 | 48.18 |
HORVU2Hr1G111140.3 | Barley | golgi | 46.04 | 44.56 |
HORVU3Hr1G081610.2 | Barley | peroxisome, plasma membrane | 46.67 | 42.67 |
HORVU6Hr1G071810.8 | Barley | golgi, peroxisome, plasma membrane | 39.38 | 35.86 |
Protein Annotations
EMBL:AK372223 | EnsemblPlants:HORVU3Hr1G091120.3 | EnsemblPlantsGene:HORVU3Hr1G091120 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF295 | PFAM:PF01490 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI0002007F23 | UniProt:F2E7U9 | MapMan:24.2.3.4.1 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E7U9]
Coordinates
chrchr3H:-:634579672..634581773
Molecular Weight (calculated)
51999.7 Da
IEP (calculated)
8.564
GRAVY (calculated)
0.515
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MADKVVATYY YPPMEVAAAE LGQIAGSKLD DDGRNKRTGT MWTASSHIIT AVIGSGVLSL GWAIAQLGWV AGPAVMLLFS LVTYFTSSLL ADCYRSGDQS
101: TGKRNYTYMD AVNANLSGIK VQICGVLQYA NIVGVAIGYT IAASISMLAI KRANCFHGNG HADPCKVSSV PYMIIFGVAQ VFFSQIPDFD QISWLSMLAA
201: AMSFTYSSIG LGLGIVQVIA NGGMKGSLTG ISIGTVTPMQ KVWRSLQAFG DIAFAYSYSL ILIEIQDTIR APPPSESTVM KRATMVSVAV TTVFYMLCGC
301: MGYAAFGDAA PGNLLTGFGF YEPFWLLDVA NAAIVVHLVG AYQVYCQPLF AFVEKWAAKR WPESTFVTGE VEVPLFRTYK VNMFRATWRT AFVVATTVVS
401: MMLPFFNDVV GFLGALGFWP LTVYFPVEMY VVQKKVPKWS TRWVCLQMLS VGCLAISLAA AAGSIAGIKS DLKVYHPFKS
101: TGKRNYTYMD AVNANLSGIK VQICGVLQYA NIVGVAIGYT IAASISMLAI KRANCFHGNG HADPCKVSSV PYMIIFGVAQ VFFSQIPDFD QISWLSMLAA
201: AMSFTYSSIG LGLGIVQVIA NGGMKGSLTG ISIGTVTPMQ KVWRSLQAFG DIAFAYSYSL ILIEIQDTIR APPPSESTVM KRATMVSVAV TTVFYMLCGC
301: MGYAAFGDAA PGNLLTGFGF YEPFWLLDVA NAAIVVHLVG AYQVYCQPLF AFVEKWAAKR WPESTFVTGE VEVPLFRTYK VNMFRATWRT AFVVATTVVS
401: MMLPFFNDVV GFLGALGFWP LTVYFPVEMY VVQKKVPKWS TRWVCLQMLS VGCLAISLAA AAGSIAGIKS DLKVYHPFKS
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.