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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • plasma membrane 2
  • mitochondrion 1
  • endoplasmic reticulum 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G285300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, peroxisome 91.01 91.01
TraesCS6D01G265800.1 Wheat plasma membrane 92.29 88.32
TraesCS6B01G314200.1 Wheat cytosol, peroxisome, plasma membrane 93.15 88.24
Os02t0722400-01 Rice endoplasmic reticulum, plasma membrane 70.88 73.23
EES07345 Sorghum golgi, peroxisome, plasma membrane 73.23 72.77
Zm00001d017880_P006 Maize plasma membrane 69.81 66.4
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 65.1 57.69
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 57.17 57.42
GSMUA_Achr3P10920_001 Banana plasma membrane 57.17 57.3
VIT_19s0015g01290.t01 Wine grape plasma membrane 55.46 54.87
VIT_19s0015g01300.t01 Wine grape plasma membrane 52.89 53.93
CDX87155 Canola plasma membrane 40.26 53.41
Solyc07g066010.2.1 Tomato plasma membrane 51.82 53.07
PGSC0003DMT400057313 Potato plasma membrane 51.82 53.07
KRG98404 Soybean plasma membrane 51.18 51.84
KRG98405 Soybean plasma membrane 50.96 51.63
KRH14179 Soybean plasma membrane 41.33 51.06
KRH46488 Soybean plasma membrane 50.32 50.98
KRH73957 Soybean plasma membrane 50.11 50.76
Solyc07g066020.2.1 Tomato plasma membrane 50.96 50.64
PGSC0003DMT400057311 Potato plasma membrane 50.96 50.42
Bra026481.1-P Field mustard plasma membrane 50.32 50.32
AT5G23810.1 Thale cress plasma membrane 50.11 50.11
CDY16869 Canola plasma membrane 50.11 49.79
KRG98402 Soybean plasma membrane 48.61 49.13
KRG93981 Soybean plasma membrane 32.12 49.02
KRH14166 Soybean plasma membrane 45.82 47.66
KRH46483 Soybean plasma membrane 33.19 47.4
HORVU3Hr1G091120.3 Barley plasma membrane 48.39 47.08
HORVU2Hr1G084780.1 Barley extracellular 22.91 46.72
HORVU3Hr1G091110.1 Barley cytosol, vacuole 11.78 46.61
KRH73962 Soybean plasma membrane 47.54 46.54
HORVU5Hr1G037660.1 Barley plasma membrane 47.32 46.14
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 44.54 44.54
HORVU2Hr1G111140.3 Barley golgi 47.11 44.35
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 46.9 44.33
HORVU4Hr1G043680.3 Barley plasma membrane 46.25 44.26
HORVU2Hr1G061190.4 Barley plasma membrane 45.4 43.71
HORVU3Hr1G091020.2 Barley mitochondrion 48.39 42.56
HORVU7Hr1G088510.2 Barley plasma membrane 41.76 42.48
HORVU7Hr1G038330.1 Barley plasma membrane 44.54 42.28
HORVU3Hr1G091070.1 Barley cytosol 41.11 41.92
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 43.68 41.63
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 44.33 40.04
HORVU2Hr1G084710.1 Barley plasma membrane 31.69 39.68
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 43.68 38.86
Protein Annotations
EnsemblPlants:HORVU6Hr1G071840.3EnsemblPlantsGene:HORVU6Hr1G071840GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF228PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000296A105
UniProt:M0WZG5MapMan:24.2.3.4.1::::
Description
No Description!
Coordinates
chrchr6H:+:499046923..499052469
Molecular Weight (calculated)
49223.6 Da
IEP (calculated)
8.243
GRAVY (calculated)
0.483
Length
467 amino acids
Sequence
(BLAST)
001: MGGGRTGRGR GDRQAEPLLD KLSGSSYDLS EEHPVKRTGT VWTAMAHVIT AVIGSGVLSL AWSVAQLGWV GGPAAMVLFA GVTVVQSSLL ADCYISRDPE
101: RGAAVRNRSY VDAVKLYLGE KSQVLSGVFL GFSLFGNSVV YTLTSAASMR AIERANCYHR EGHGAPCCAA AGGGGSSDAY YMLMFGLAQA ALSQIPDFHS
201: MAWLSVFAAA MSFSYSFIGF GLGAAKVIDN GVIKGAIGGV SLVSPTQKVW RVAQALGDIA FAYPFSLVLL EIEDTLGSPP AESETMKAAS RASIAVTTFF
301: YLGCGCFGYA AFGDGTPGNL LAGFGEPYWL VGLANLCVVL HLLGGYQVYA QPMFALVERR FGAGVAEIPL LGRVTVARLC FRTANVAAAT AVAVWFPYFN
401: QVVGLIGAFT FWPLAIHFPV QMYLAQGKVA PWTRRWIAIQ AFSAACLIAC GFASVGSAMG VFSPERS
Best Arabidopsis Sequence Match ( AT5G23810.1 )
(BLAST)
001: MDIKEDDESR VITPTELQLH DSVTARTGTL WTAVAHIITG VIGAGVLSLA WATAELGWIA GPAALIAFAG VTLLSAFLLS DCYRFPDPNN GPLRLNSYSQ
101: AVKLYLGKKN EIVCGVVVYI SLFGCGIAYT IVIATCSRAI MKSNCYHRNG HNATCSYGDN NNYFMVLFGL TQIFMSQIPN FHNMVWLSLV AAIMSFTYSF
201: IGIGLALGKI IENRKIEGSI RGIPAENRGE KVWIVFQALG NIAFSYPFSI ILLEIQDTLR SPPAEKQTMK KASTVAVFIQ TFFFFCCGCF GYAAFGDSTP
301: GNLLTGFGFY EPFWLVDFAN ACIVLHLVGG YQVYSQPIFA AAERSLTKKY PENKFIARFY GFKLPLLRGE TVRLNPMRMC LRTMYVLITT GVAVMFPYFN
401: EVLGVVGALA FWPLAVYFPV EMCILQKKIR SWTRPWLLLR GFSFVCLLVC LLSLVGSIYG LVGAKFG
Arabidopsis Description
AAP7Probable amino acid permease 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF99]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.