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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, golgi

Predictor Summary:
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, peroxisome
Any Predictor:golgi, mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 96.15 96.94
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 94.94 95.52
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 86.23 87.84
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 87.04 86.69
Zm00001d010231_P001 Maize plasma membrane 83.2 85.98
TraesCS1B01G275200.1 Wheat mitochondrion 97.17 85.71
HORVU3Hr1G091110.1 Barley cytosol, vacuole 20.24 84.75
HORVU3Hr1G091120.3 Barley plasma membrane 80.36 82.71
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 68.62 75.84
GSMUA_Achr10P... Banana plasma membrane 63.77 75.54
HORVU3Hr1G091020.2 Barley mitochondrion 80.97 75.33
GSMUA_Achr2P20670_001 Banana plasma membrane 66.8 74.83
HORVU3Hr1G091070.1 Barley cytosol 69.03 74.45
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 71.86 73.2
PGSC0003DMT400030727 Potato plasma membrane 70.04 73.15
Solyc06g060110.2.1 Tomato plasma membrane 69.43 72.82
HORVU5Hr1G037660.1 Barley plasma membrane 70.24 72.44
Bra015673.1-P Field mustard plasma membrane 69.23 71.85
CDX88364 Canola plasma membrane 68.83 71.43
CDX87522 Canola plasma membrane 68.62 71.22
HORVU4Hr1G043680.3 Barley plasma membrane 70.24 71.11
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 69.23 71.1
AT5G63850.1 Thale cress plasma membrane 67.0 71.03
CDX88365 Canola plasma membrane 68.42 71.01
PGSC0003DMT400015426 Potato plasma membrane 68.42 70.56
AT1G77380.1 Thale cress plasma membrane 67.81 70.38
VIT_10s0116g01380.t01 Wine grape plasma membrane 64.17 69.98
CDY39844 Canola plasma membrane 65.99 69.96
Bra029199.1-P Field mustard plasma membrane 65.79 69.74
CDY31348 Canola plasma membrane 65.59 69.53
Solyc11g005070.1.1 Tomato plasma membrane 66.8 69.33
CDY21569 Canola plasma membrane 67.81 69.07
CDX69918 Canola plasma membrane 67.81 69.07
Bra009371.1-P Field mustard plasma membrane 67.61 68.87
CDY43761 Canola plasma membrane 64.78 68.67
CDX84450 Canola plasma membrane 64.57 68.45
Bra024241.1-P Field mustard plasma membrane 64.57 68.45
CDX78353 Canola plasma membrane 67.21 68.17
Bra006016.1-P Field mustard plasma membrane 67.0 67.97
CDX81121 Canola plasma membrane 67.0 67.97
PGSC0003DMT400043280 Potato plasma membrane 64.37 67.95
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 67.61 67.75
KRH53283 Soybean golgi, peroxisome, plasma membrane 66.6 67.56
KRH17988 Soybean plasma membrane 65.38 67.43
KRH64623 Soybean cytosol, peroxisome, plasma membrane 66.4 67.35
KRH16402 Soybean plasma membrane 64.57 66.6
CDY36017 Canola plasma membrane 64.37 66.11
Bra014020.1-P Field mustard plasma membrane 63.97 65.7
CDY60629 Canola plasma membrane 55.06 65.54
Bra032199.1-P Field mustard plasma membrane 64.17 65.09
CDY43854 Canola plasma membrane 64.17 65.09
PGSC0003DMT400008650 Potato plasma membrane 60.93 64.87
AT1G44100.1 Thale cress plasma membrane 62.55 64.38
VIT_07s0031g02340.t01 Wine grape peroxisome 72.87 63.94
Bra036939.1-P Field mustard plasma membrane 60.93 63.24
CDY14972 Canola plasma membrane 60.93 63.24
CDY47793 Canola plasma membrane 60.53 62.82
HORVU2Hr1G084780.1 Barley extracellular 28.54 61.57
CDY71454 Canola golgi, peroxisome, plasma membrane 34.82 61.43
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 57.69 58.16
HORVU7Hr1G038330.1 Barley plasma membrane 56.88 57.11
HORVU7Hr1G088510.2 Barley plasma membrane 52.23 56.21
HORVU2Hr1G061190.4 Barley plasma membrane 55.06 56.08
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 54.66 52.22
HORVU2Hr1G084710.1 Barley plasma membrane 38.87 51.47
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 46.36 49.25
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 44.33 46.9
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 43.93 46.47
HORVU2Hr1G111140.3 Barley golgi 42.71 42.54
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 44.94 42.29
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 37.65 35.29
Protein Annotations
EnsemblPlants:HORVU1Hr1G064970.10EnsemblPlantsGene:HORVU1Hr1G064970GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF295PFAM:PF01490SEG:segTMHMM:TMhelixUniParc:UPI000B485171
UniProt:A0A287FZK3MapMan:24.2.3.4.1::::
Description
No Description!
Coordinates
chrchr1H:+:465041160..465043238
Molecular Weight (calculated)
53816.8 Da
IEP (calculated)
8.438
GRAVY (calculated)
0.497
Length
494 amino acids
Sequence
(BLAST)
001: WCRSEMGQNG VGKNYYQGTA AAAMEVSSVE HGQAAASKCY DDDGRLKRTG TMWTASAHII TAVIGSGVLS LAWAIGQLGW VAGPAVMLLF SLVTYYTSSL
101: LSDCYRSGDE TTGKRNYTYM DAVNANLSGI KVQLCGFLQY ANIVGVAIGY TIAASISMLA IKKANCFHVK GHVNPCHISS TPYMIIFGVA EIFFSQIPDF
201: DQISWLSILA AIMSFTYSII GLSLGIVQVV ANKGVKGSLT GISIGVVTPM DKVWRSLQAF GDIAFAYSYS LILIEIQDTI RAPPPSESKV MRRATVVSVA
301: TTTLFYMLCG CMGYAAFGDN APGNLLTGFG FYEPFWLLDI ANAAIVVHLV GAYQVYCQPL FAFVEKWAQQ RWPKSRFITG EIQVPLISSG FKINLFRLTW
401: RSAFVVATTV VSMLLPFFND VVGFLGAIGF WPLTVYFPVE MYIVQKKIPK WSSQWVCLQL LSLACLIITI AAAAGSIAGI MSDLKVYKPF STTD
Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.