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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78353 Canola plasma membrane 99.18 99.18
CDX69918 Canola plasma membrane 95.48 95.88
CDY21569 Canola plasma membrane 94.87 95.26
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 93.84 92.7
CDY31348 Canola plasma membrane 83.78 87.55
CDY39844 Canola plasma membrane 83.78 87.55
CDY43761 Canola plasma membrane 81.72 85.41
CDX84450 Canola plasma membrane 80.7 84.33
CDX88364 Canola plasma membrane 71.87 73.53
CDX87522 Canola plasma membrane 71.66 73.32
GSMUA_Achr2P20670_001 Banana plasma membrane 66.32 73.24
CDX88365 Canola plasma membrane 71.46 73.11
GSMUA_Achr10P... Banana plasma membrane 62.22 72.66
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 66.12 72.04
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 64.48 71.69
VIT_10s0116g01380.t01 Wine grape plasma membrane 66.53 71.52
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 60.57 71.43
TraesCS3A01G406800.1 Wheat plasma membrane 66.74 69.59
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 69.2 69.48
Zm00001d010231_P001 Maize plasma membrane 67.56 68.83
HORVU3Hr1G091120.3 Barley plasma membrane 67.76 68.75
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 68.38 68.66
Os01t0882800-01 Rice plasma membrane 68.58 68.44
TraesCS3A01G406900.1 Wheat plasma membrane 67.35 68.33
TraesCS3B01G441100.1 Wheat plasma membrane 67.15 68.12
TraesCS3A01G407000.1 Wheat plasma membrane 66.74 67.71
TraesCS3B01G441200.1 Wheat plasma membrane 66.74 67.71
TraesCS3D01G402200.1 Wheat plasma membrane 66.94 67.63
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 67.97 67.55
EES03989 Sorghum plasma membrane 67.97 67.41
Zm00001d053143_P002 Maize plasma membrane 65.3 67.37
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 65.71 67.23
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 67.97 67.0
Zm00001d023593_P001 Maize plasma membrane 65.5 66.88
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 67.35 66.8
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 67.97 66.73
VIT_07s0031g02340.t01 Wine grape peroxisome 77.0 66.61
Zm00001d042619_P002 Maize plasma membrane 67.35 66.4
TraesCS3D01G402300.1 Wheat plasma membrane 67.15 66.33
TraesCS4D01G097400.1 Wheat plasma membrane 66.32 66.32
EES08162 Sorghum plasma membrane 65.5 66.32
Os12t0181500-01 Rice plasma membrane 64.68 66.32
Zm00001d023592_P001 Maize plasma membrane 65.3 66.25
EES16764 Sorghum plasma membrane 65.5 66.18
TraesCS4B01G100800.1 Wheat plasma membrane 66.12 66.12
Os12t0181600-01 Rice plasma membrane 64.48 66.11
HORVU3Hr1G091110.1 Barley cytosol, vacuole 16.02 66.1
TraesCS4A01G215300.1 Wheat plasma membrane 65.91 66.05
HORVU4Hr1G043680.3 Barley plasma membrane 66.12 65.98
Zm00001d023603_P001 Maize plasma membrane 50.1 65.95
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 67.56 65.93
EES15765 Sorghum plasma membrane 64.68 65.76
EES16763 Sorghum plasma membrane 64.89 65.7
HORVU5Hr1G037660.1 Barley plasma membrane 64.27 65.34
TraesCS5B01G116100.1 Wheat plasma membrane 64.27 65.34
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 64.48 65.15
TraesCS5A01G115100.1 Wheat plasma membrane 64.07 65.14
TraesCS5D01G125700.1 Wheat plasma membrane 64.07 65.14
EES16761 Sorghum plasma membrane 63.45 64.64
CDY60629 Canola plasma membrane 54.62 64.1
CDY36017 Canola plasma membrane 63.24 64.03
CDY43854 Canola plasma membrane 63.86 63.86
CDY14972 Canola plasma membrane 62.01 63.45
CDY47793 Canola plasma membrane 61.81 63.24
Zm00001d004705_P001 Maize plasma membrane 58.73 63.0
GSMUA_Achr8P32600_001 Banana plasma membrane 70.64 62.89
EES08159 Sorghum cytosol, peroxisome, plasma membrane 62.63 62.76
HORVU3Hr1G091070.1 Barley cytosol 58.32 62.01
HORVU3Hr1G091020.2 Barley mitochondrion 67.56 61.96
CDY71454 Canola golgi, peroxisome, plasma membrane 35.52 61.79
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 67.35 61.77
KXG23123 Sorghum mitochondrion, plastid 63.24 61.35
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 59.55 61.18
TraesCS5B01G120000.1 Wheat plasma membrane 59.14 61.15
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 57.08 60.3
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 63.04 59.84
TraesCS1B01G275200.1 Wheat mitochondrion 67.97 59.11
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 57.7 58.3
HORVU2Hr1G084780.1 Barley extracellular 26.28 55.9
CDY04349 Canola cytosol, peroxisome, plasma membrane 55.44 55.79
Zm00001d050211_P001 Maize peroxisome 51.95 55.73
CDY57931 Canola plasma membrane 52.98 55.36
CDY48843 Canola cytosol, peroxisome, plasma membrane 54.41 55.32
CDY53793 Canola cytosol, peroxisome, plasma membrane 54.41 55.32
CDY46779 Canola plasma membrane 54.21 55.11
EES13588 Sorghum cytosol, peroxisome, plasma membrane 55.65 54.42
CDY49542 Canola plasma membrane 23.0 54.37
TraesCS2B01G367000.1 Wheat plasma membrane 55.03 54.14
CDY22609 Canola plasma membrane 53.18 53.85
CDY63746 Canola extracellular, plasma membrane 39.22 53.65
CDY53831 Canola plasma membrane 52.77 53.43
CDY44564 Canola cytosol, peroxisome, plasma membrane 55.44 53.25
CDY57932 Canola plasma membrane 50.51 53.25
CDY60248 Canola cytosol, peroxisome, plasma membrane 55.24 53.06
CDY62727 Canola cytosol, peroxisome, plasma membrane 50.92 52.88
TraesCS3A01G065600.1 Wheat plasma membrane 49.9 52.83
CDY62728 Canola plasma membrane 51.75 52.28
TraesCS7D01G388300.1 Wheat plasma membrane 56.06 51.8
CDY22607 Canola plasma membrane 50.92 51.56
CDY22608 Canola plasma membrane 52.16 50.4
TraesCS2D01G346500.1 Wheat plasma membrane 51.75 50.2
CDY04448 Canola peroxisome 54.83 49.44
HORVU2Hr1G084710.1 Barley plasma membrane 37.37 48.79
CDY16869 Canola plasma membrane 46.82 48.51
CDX87155 Canola plasma membrane 34.5 47.73
Os12t0195100-00 Rice plastid 42.09 41.33
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 40.04 37.64
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 39.43 37.35
CDY53832 Canola plasma membrane 51.13 23.62
Protein Annotations
EnsemblPlants:CDX81121EnsemblPlantsGene:GSBRNA2T00134570001GO:A0A078CVG9GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF474PFAM:PF01490ProteinID:CDX81121ProteinID:CDX81121.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EBCF87MapMan:24.2.3.4.1::
Description
BnaC03g03750D
Coordinates
chrLK031823:+:1826701..1829104
Molecular Weight (calculated)
53454.5 Da
IEP (calculated)
8.879
GRAVY (calculated)
0.477
Length
487 amino acids
Sequence
(BLAST)
001: MGETAAANHH HHHHGHQVFD ASVPQQPAFK CFDDDGRLKR TGTVWTASAH IITAVIGSGV LSLAWAIAQL GWIAGPAVML LFSFVTLYSS TLLSDCYRTG
101: DAVSGKRNYT YMDAVRSILG GFKFKICGLI QYLNLFGIAV GYTIAASISM MAIKRSNCFH KSGGKDPCHM SSNPYMIIFG VTEILLSQVP DFDQIWWISI
201: VAAVMSFTYS AIGLALGIVQ VAANGVFKGS LTGISIGTVT QTQKIWRTFQ ALGDIAFAYS YSVVLIEIQD TVRSPPSEST TMKKATKISI AVTTIFYMLC
301: GSMGYAAFGD AAPGNLLTGF GFYNPFWLLD IANAAIVVHL IGAYQVFSQP IFAFVEKSVS ERFPDNDLLT KELQFKIPGI RSPYKTNVFR VVFRCCFVVL
401: TTVISMLMPF FNDVVGILGA LGFWPLTVYF PVEMYIKQRK VEKWSTRWVC LQMLSVACLV ISVVAGVGSI AGVMLDLKVY KPFQSTY
Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.