Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48843 | Canola | cytosol, peroxisome, plasma membrane | 97.57 | 41.96 |
| CDY63746 | Canola | extracellular, plasma membrane | 71.84 | 41.57 |
| CDY53793 | Canola | cytosol, peroxisome, plasma membrane | 96.6 | 41.54 |
| CDY04349 | Canola | cytosol, peroxisome, plasma membrane | 97.57 | 41.53 |
| Bra035446.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 100.0 | 40.63 |
| CDY44564 | Canola | cytosol, peroxisome, plasma membrane | 100.0 | 40.63 |
| CDY60248 | Canola | cytosol, peroxisome, plasma membrane | 99.51 | 40.43 |
| AT1G58360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 93.69 | 39.79 |
| CDY04448 | Canola | peroxisome | 96.12 | 36.67 |
| CDY57932 | Canola | plasma membrane | 77.67 | 34.63 |
| CDY22607 | Canola | plasma membrane | 78.64 | 33.68 |
| CDY53831 | Canola | plasma membrane | 77.18 | 33.06 |
| CDY22609 | Canola | plasma membrane | 77.18 | 33.06 |
| CDY57931 | Canola | plasma membrane | 74.27 | 32.83 |
| CDY62728 | Canola | plasma membrane | 76.21 | 32.57 |
| CDY46779 | Canola | plasma membrane | 74.27 | 31.94 |
| CDY22608 | Canola | plasma membrane | 74.76 | 30.56 |
| TraesCS2D01G256000.1 | Wheat | plasma membrane | 64.08 | 27.33 |
| CDY62727 | Canola | cytosol, peroxisome, plasma membrane | 62.14 | 27.29 |
| GSMUA_Achr4P32180_001 | Banana | plasma membrane | 63.59 | 27.23 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 63.59 | 27.12 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 63.59 | 27.12 |
| EER97947 | Sorghum | golgi, peroxisome, plasma membrane | 63.11 | 27.08 |
| HORVU2Hr1G061190.4 | Barley | plasma membrane | 63.11 | 26.8 |
| Os07t0134000-02 | Rice | plasma membrane | 63.11 | 26.69 |
| CDY60629 | Canola | plasma membrane | 52.43 | 26.02 |
| Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 61.16 | 25.66 |
| CDY47793 | Canola | plasma membrane | 55.34 | 23.95 |
| CDY14972 | Canola | plasma membrane | 55.34 | 23.95 |
| CDY43761 | Canola | plasma membrane | 52.43 | 23.18 |
| CDY39844 | Canola | plasma membrane | 52.43 | 23.18 |
| CDY31348 | Canola | plasma membrane | 52.43 | 23.18 |
| CDX69918 | Canola | plasma membrane | 54.37 | 23.09 |
| CDY21569 | Canola | plasma membrane | 54.37 | 23.09 |
| CDY36017 | Canola | plasma membrane | 53.88 | 23.08 |
| CDX81121 | Canola | plasma membrane | 54.37 | 23.0 |
| CDX84450 | Canola | plasma membrane | 51.94 | 22.96 |
| CDX88364 | Canola | plasma membrane | 52.91 | 22.9 |
| CDX78353 | Canola | plasma membrane | 53.88 | 22.79 |
| CDY16869 | Canola | plasma membrane | 51.94 | 22.77 |
| CDX87522 | Canola | plasma membrane | 52.43 | 22.69 |
| CDX88365 | Canola | plasma membrane | 51.94 | 22.48 |
| CDY43854 | Canola | plasma membrane | 52.43 | 22.18 |
| CDY53832 | Canola | plasma membrane | 78.16 | 15.28 |
| CDX87155 | Canola | plasma membrane | 22.82 | 13.35 |
| CDY71454 | Canola | golgi, peroxisome, plasma membrane | 2.43 | 1.79 |
Protein Annotations
| EnsemblPlants:CDY49542 | EnsemblPlantsGene:GSBRNA2T00093240001 | GO:A0A078IHY5 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF278 | PFAM:PF01490 | PFscan:PS51257 | ProteinID:CDY49542 |
| ProteinID:CDY49542.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EECA13 | UniProt:A0A078IHY5 | MapMan:24.2.3.4.1 |
Description
BnaCnng17660DBnaCnng17660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHY5]
Coordinates
chrLK032839:-:108549..109541
Molecular Weight (calculated)
23312.8 Da
IEP (calculated)
9.554
GRAVY (calculated)
0.591
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRASLVGVS TTTFFYILCG CLGYAAFGNK APGDFLTDFG FYEPFWLIDF ANACIAFHLI GAYQVFAQPI FQFVEKRCNR NWPDNKFITS EYSVNVPFLG
101: KFNISLFRLV WRTAYVVITT VVAMIFPFFN AILGLIGAAS FWPLTVYFPV EMHIAQTKVK KYSPRWIGLK MLCWVCLIVS LLAAAGSIAG LISSVKTYKP
201: FRTIHE
101: KFNISLFRLV WRTAYVVITT VVAMIFPFFN AILGLIGAAS FWPLTVYFPV EMHIAQTKVK KYSPRWIGLK MLCWVCLIVS LLAAAGSIAG LISSVKTYKP
201: FRTIHE
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.