Factsheet for TraesCS2B01G266600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G256000.1	Wheat	plasma membrane	98.76	98.76
TraesCS2A01G268200.1	Wheat	plasma membrane	98.34	98.34
HORVU2Hr1G061190.4	Barley	plasma membrane	96.89	96.49
Os07t0134000-02	Rice	plasma membrane	88.61	87.89
EER97947	Sorghum	golgi, peroxisome, plasma membrane	84.68	85.21
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	83.64	82.28
GSMUA_Achr4P32180_001	Banana	plasma membrane	74.74	75.05
KRH62133	Soybean	plasma membrane	68.53	69.1
Bra039735.1-P	Field mustard	plasma membrane	66.87	68.72
KRH52842	Soybean	plasma membrane	68.12	68.68
PGSC0003DMT400012730	Potato	plasma membrane	67.29	67.57
CDY46779	Canola	plasma membrane	66.87	67.43
AT5G49630.1	Thale cress	cytosol	67.08	67.36
Solyc04g077050.2.1	Tomato	plasma membrane	66.87	67.15
KRH04858	Soybean	plasma membrane	65.01	66.81
Solyc01g106800.2.1	Tomato	plasma membrane	63.77	66.24
CDY49542	Canola	plasma membrane	27.12	63.59
VIT_18s0001g08270.t01	Wine grape	plasma membrane	63.56	63.56
CDY63746	Canola	extracellular, plasma membrane	46.17	62.64
KRH35634	Soybean	plasma membrane	59.63	62.34
CDY04349	Canola	cytosol, peroxisome, plasma membrane	61.49	61.36
PGSC0003DMT400030111	Potato	plasma membrane	61.9	61.27
AT1G10010.2	Thale cress	cytosol, peroxisome, plasma membrane	60.25	61.13
Solyc12g088190.1.1	Tomato	plasma membrane	61.49	60.86
CDY48843	Canola	cytosol, peroxisome, plasma membrane	60.25	60.75
AT1G58360.1	Thale cress	cytosol, peroxisome, plasma membrane	60.87	60.62
Bra027868.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.04	60.54
CDY53793	Canola	cytosol, peroxisome, plasma membrane	60.04	60.54
Bra019967.1-P	Field mustard	plasma membrane	47.62	60.05
CDY57932	Canola	plasma membrane	57.35	59.96
CDY22609	Canola	plasma membrane	59.01	59.25
Bra019969.1-P	Field mustard	plasma membrane	53.83	59.09
CDY53831	Canola	plasma membrane	58.8	59.04
CDY57931	Canola	plasma membrane	56.94	59.01
Bra031696.1-P	Field mustard	plasma membrane	34.58	58.8
Bra031697.1-P	Field mustard	plasma membrane	58.39	58.75
CDY62728	Canola	plasma membrane	58.59	58.71
Bra031695.1-P	Field mustard	plasma membrane	56.52	58.71
CDY22607	Canola	plasma membrane	58.39	58.63
Bra035446.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.49	58.58
CDY44564	Canola	cytosol, peroxisome, plasma membrane	61.49	58.58
CDY60248	Canola	cytosol, peroxisome, plasma membrane	61.28	58.38
TraesCS5B01G116100.1	Wheat	plasma membrane	57.35	57.83
TraesCS4B01G100800.1	Wheat	plasma membrane	57.76	57.29
TraesCS2B01G493000.1	Wheat	plasma membrane	56.52	56.76
TraesCS7B01G100100.1	Wheat	peroxisome	55.49	56.66
TraesCS3B01G441100.1	Wheat	plasma membrane	55.9	56.25
TraesCS3B01G441200.1	Wheat	plasma membrane	55.69	56.04
CDY62727	Canola	cytosol, peroxisome, plasma membrane	54.24	55.86
TraesCS5B01G120000.1	Wheat	plasma membrane	54.45	55.84
TraesCS7B01G093200.1	Wheat	peroxisome	55.9	55.79
CDY22608	Canola	plasma membrane	57.56	55.16
TraesCS7B01G271200.1	Wheat	peroxisome	55.69	54.9
Bra017905.1-P	Field mustard	peroxisome	61.28	54.61
CDY04448	Canola	peroxisome	60.87	54.44
TraesCS3B01G441300.2	Wheat	cytosol, peroxisome, plasma membrane, plastid	56.31	51.22
TraesCS5B01G120800.1	Wheat	plasma membrane	48.65	50.76
TraesCS3B01G420700.1	Wheat	plasma membrane	49.07	50.64
TraesCS2B01G367000.1	Wheat	plasma membrane	50.93	49.7
TraesCS3B01G420600.1	Wheat	plasma membrane	48.24	49.57
TraesCS2B01G351100.2	Wheat	cytosol, peroxisome, plasma membrane	47.41	49.25
TraesCS1B01G275200.1	Wheat	mitochondrion	56.73	48.93
TraesCS2B01G527800.1	Wheat	plasma membrane	46.79	46.69
TraesCS6B01G314000.1	Wheat	golgi, peroxisome, plasma membrane	43.69	44.89
TraesCS6B01G314200.1	Wheat	cytosol, peroxisome, plasma membrane	44.51	43.61
Bra019968.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	40.17	37.16
CDY53832	Canola	plasma membrane	58.39	26.76

Protein Annotations

EnsemblPlants:TraesCS2B01G266600.1	EnsemblPlantsGene:TraesCS2B01G266600	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.1	:	:	:

Description

No Description!

Coordinates

chr2B:+:359130518..359134569

Molecular Weight (calculated)

52203.5 Da

IEP (calculated)

8.858

GRAVY (calculated)

0.487

Length

483 amino acids

Sequence
(BLAST)

001: MGMEKGKADP AAFSIAEAGF GDRTDIDDDG RERRTGTLVT ASAHIITAVI GSGVLSLAWA IAQLGWVIGP AVLVAFSVIT WFCSSLLADC YRSPDPVHGK
101: RNYTYGQAVR ANLGVSKYRL CSLAQYVNLV GVTIGYTITT AISMGAIGRS NCFHRNGHNA ACEASNTTNM IIFAAIQILL SQLPNFHKIW WLSIVAAVMS
201: LAYSSIGLGL SIAKIAGGVH AKTTLTGVTV GVDVSGREKI WRTFQSLGDI AFAYSYSNVL IEIQDTLRSS PAENTVMKKA SLIGVSTTTT FYMLCGVLGY
301: AAFGSSAPGN FLTGFGFYEP FWLVDIGNVC IVVHLVGAYQ VFCQPIYQFV EGWARSRWPD SAFLHAERVL RLPAVLGGGE VPVSPFRLVW RTAYVVLTAV
401: VAMLFPFFND FLGLIGAVSF WPLTVYFPVE MYMAQAKVRR FSPTWTWMNV LSVACLVVSV LAAAGSVQGL IKDVAGYKPF KVS

Best Arabidopsis Sequence Match ( AT5G49630.1 )
(BLAST)

001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P

Arabidopsis Description

AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.