Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g077050.2.1 | Tomato | plasma membrane | 97.51 | 97.51 |
| PGSC0003DMT400030111 | Potato | plasma membrane | 80.46 | 79.3 |
| Bra039735.1-P | Field mustard | plasma membrane | 75.68 | 77.45 |
| KRH52842 | Soybean | plasma membrane | 76.92 | 77.24 |
| AT5G49630.1 | Thale cress | cytosol | 77.13 | 77.13 |
| KRH62133 | Soybean | plasma membrane | 76.72 | 77.04 |
| CDY46779 | Canola | plasma membrane | 75.88 | 76.2 |
| VIT_18s0001g08270.t01 | Wine grape | plasma membrane | 75.88 | 75.57 |
| KRH04858 | Soybean | plasma membrane | 71.31 | 72.98 |
| EER97947 | Sorghum | golgi, peroxisome, plasma membrane | 67.15 | 67.29 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 67.57 | 67.29 |
| TraesCS2D01G256000.1 | Wheat | plasma membrane | 67.36 | 67.08 |
| GSMUA_Achr4P32180_001 | Banana | plasma membrane | 66.94 | 66.94 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 67.15 | 66.87 |
| HORVU2Hr1G061190.4 | Barley | plasma membrane | 67.15 | 66.6 |
| Os07t0134000-02 | Rice | plasma membrane | 66.74 | 65.91 |
| Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 66.94 | 65.58 |
| PGSC0003DMT400030727 | Potato | plasma membrane | 62.37 | 63.42 |
| PGSC0003DMT400015426 | Potato | plasma membrane | 61.54 | 61.8 |
| PGSC0003DMT400043280 | Potato | plasma membrane | 57.17 | 58.76 |
| PGSC0003DMT400008650 | Potato | plasma membrane | 54.89 | 56.9 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 50.1 | 52.85 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 44.91 | 45.76 |
Protein Annotations
| EMBL:Y09825 | EnsemblPlants:PGSC0003DMT400012730 | EnsemblPlantsGene:PGSC0003DMG400004961 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF278 | PFAM:PF01490 | PGSC:PGSC0003DMG400004961 | ProteinID:CAA70968 |
| ProteinID:CAA70968.2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002958777 | UniProt:M1A1P2 | MapMan:24.2.3.4.1 |
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400004961]
Coordinates
chr4:+:66074335..66079024
Molecular Weight (calculated)
52745.1 Da
IEP (calculated)
8.660
GRAVY (calculated)
0.440
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPEFQKNAM YVSNELENGD VQKNFDDDGR EKRTGTLLTA SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLFAFSFITY FTSTLLADCY RSPGPISGKR
101: NYTYMDVVRS HLGGVKVTLC GIAQYANLVG VTIGYTITAS ISMVAVKRSN CFHKNGHEAS CSIESYPYMI IFAVIQIVLS QIPNFHKLSW LSILAAVMSF
201: TYASIGLGLS IAKVSGVGHH VKTSLTGVVV GVDVSGTEKV WRSFQAIGDI AFAYAYSTVL IEIQDTLKSS PPESKVMKRA SLAGVSTTTL FYVLCGTIGY
301: AAFGNNAPGN FLTGFGFYEP FWLIDFANVC IAVHLVGAYQ VFCQPLYGFV EARCSQRWPD SKFITSEYAM RVPCCGTYNL NLFRLVWRTT YVIVTAVIAM
401: IFPFFNDFLG LIGAASFYPL TVYFPIEMYI AQRKIPKYSF TWVWLKILSW TCLIVSLVAA AGSIQGLATD VKGYKPFSTH Q
101: NYTYMDVVRS HLGGVKVTLC GIAQYANLVG VTIGYTITAS ISMVAVKRSN CFHKNGHEAS CSIESYPYMI IFAVIQIVLS QIPNFHKLSW LSILAAVMSF
201: TYASIGLGLS IAKVSGVGHH VKTSLTGVVV GVDVSGTEKV WRSFQAIGDI AFAYAYSTVL IEIQDTLKSS PPESKVMKRA SLAGVSTTTL FYVLCGTIGY
301: AAFGNNAPGN FLTGFGFYEP FWLIDFANVC IAVHLVGAYQ VFCQPLYGFV EARCSQRWPD SKFITSEYAM RVPCCGTYNL NLFRLVWRTT YVIVTAVIAM
401: IFPFFNDFLG LIGAASFYPL TVYFPIEMYI AQRKIPKYSF TWVWLKILSW TCLIVSLVAA AGSIQGLATD VKGYKPFSTH Q
001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
Arabidopsis Description
AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.