Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g088190.1.1 | Tomato | plasma membrane | 95.7 | 95.7 |
| PGSC0003DMT400012730 | Potato | plasma membrane | 79.3 | 80.46 |
| AT5G49630.1 | Thale cress | cytosol | 71.52 | 72.56 |
| Bra039735.1-P | Field mustard | plasma membrane | 69.26 | 71.91 |
| KRH52842 | Soybean | plasma membrane | 70.49 | 71.82 |
| KRH62133 | Soybean | plasma membrane | 70.08 | 71.4 |
| VIT_18s0001g08270.t01 | Wine grape | plasma membrane | 70.08 | 70.81 |
| CDY46779 | Canola | plasma membrane | 69.26 | 70.56 |
| KRH04858 | Soybean | plasma membrane | 66.19 | 68.72 |
| GSMUA_Achr4P32180_001 | Banana | plasma membrane | 62.91 | 63.83 |
| EER97947 | Sorghum | golgi, peroxisome, plasma membrane | 62.09 | 63.12 |
| TraesCS2D01G256000.1 | Wheat | plasma membrane | 61.27 | 61.9 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 61.27 | 61.9 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 61.27 | 61.9 |
| Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 61.89 | 61.51 |
| HORVU2Hr1G061190.4 | Barley | plasma membrane | 61.07 | 61.44 |
| PGSC0003DMT400030727 | Potato | plasma membrane | 58.4 | 60.25 |
| Os07t0134000-02 | Rice | plasma membrane | 59.63 | 59.75 |
| PGSC0003DMT400015426 | Potato | plasma membrane | 56.97 | 58.04 |
| PGSC0003DMT400043280 | Potato | plasma membrane | 53.89 | 56.2 |
| PGSC0003DMT400008650 | Potato | plasma membrane | 51.84 | 54.53 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 47.34 | 50.66 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 43.44 | 44.92 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400030111 | EnsemblPlantsGene:PGSC0003DMG400011538 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM |
| PANTHER:PTHR22950 | PANTHER:PTHR22950:SF278 | PFAM:PF01490 | PGSC:PGSC0003DMG400011538 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI00029614A5 | UniProt:M1ATR6 | MapMan:24.2.3.4.1 | : | : | : |
Description
Amino acid transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400011538]
Coordinates
chr12:+:56031020..56036743
Molecular Weight (calculated)
54103.1 Da
IEP (calculated)
8.852
GRAVY (calculated)
0.389
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEFEKNST NMYVEQSPKG LENGQVQKNV DDDGREKRTG TVLTASAHII TAVIGSGVLS LAWAMAQLGW VAGPVILFLF SFITYFTSTL LADCYRFPGP
101: GSGKRNYSYM EVVRSHLGGF KVQLCGIAQY GNLVGITIGY TITASISMKA VVRSNCFHKE GHQASCTVSN YPYMVIFAII QIILSQIQNF HKLSWLSILA
201: AVMSFAYSLI GLGLSIAKVA GAGHHVKTSL TGTIVGVDVS GSQKVWRCLQ SIGDIAFAYA FATILIEIQD TLRSPPAENK VMKRASLVGV FTTTLFYVLC
301: GTIGYAAFGN NAPGNFLTGF GFYEPFWLID FANVCIAIHL IGAYQVFCQP IYGFVEGRCS EKWPDNKFIK SQHDINIPWF GVYNLNYFRM LWRTIYVIIT
401: AIIAMIFPFF NAILGLIGAA SFYPLTVYFP IEMHIAQRKI PKYSFKWIWL HILSWACLIV SLVAAVGSIE GLTQDLKTYK PFKPQDHD
101: GSGKRNYSYM EVVRSHLGGF KVQLCGIAQY GNLVGITIGY TITASISMKA VVRSNCFHKE GHQASCTVSN YPYMVIFAII QIILSQIQNF HKLSWLSILA
201: AVMSFAYSLI GLGLSIAKVA GAGHHVKTSL TGTIVGVDVS GSQKVWRCLQ SIGDIAFAYA FATILIEIQD TLRSPPAENK VMKRASLVGV FTTTLFYVLC
301: GTIGYAAFGN NAPGNFLTGF GFYEPFWLID FANVCIAIHL IGAYQVFCQP IYGFVEGRCS EKWPDNKFIK SQHDINIPWF GVYNLNYFRM LWRTIYVIIT
401: AIIAMIFPFF NAILGLIGAA SFYPLTVYFP IEMHIAQRKI PKYSFKWIWL HILSWACLIV SLVAAVGSIE GLTQDLKTYK PFKPQDHD
001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
Arabidopsis Description
AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.