Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc04g077050.2.1 | Tomato | plasma membrane | 76.6 | 76.92 |
PGSC0003DMT400012730 | Potato | plasma membrane | 75.57 | 75.88 |
Bra039735.1-P | Field mustard | plasma membrane | 72.46 | 74.47 |
AT5G49630.1 | Thale cress | cytosol | 73.71 | 74.01 |
KRH52842 | Soybean | plasma membrane | 72.05 | 72.65 |
CDY46779 | Canola | plasma membrane | 71.84 | 72.44 |
KRH62133 | Soybean | plasma membrane | 71.64 | 72.23 |
KRH04858 | Soybean | plasma membrane | 68.74 | 70.64 |
PGSC0003DMT400030111 | Potato | plasma membrane | 70.81 | 70.08 |
Solyc12g088190.1.1 | Tomato | plasma membrane | 70.39 | 69.67 |
GSMUA_Achr4P32180_001 | Banana | plasma membrane | 63.98 | 64.24 |
TraesCS2A01G268200.1 | Wheat | plasma membrane | 63.77 | 63.77 |
TraesCS2B01G266600.1 | Wheat | plasma membrane | 63.56 | 63.56 |
EER97947 | Sorghum | golgi, peroxisome, plasma membrane | 63.15 | 63.54 |
TraesCS2D01G256000.1 | Wheat | plasma membrane | 63.35 | 63.35 |
HORVU2Hr1G061190.4 | Barley | plasma membrane | 63.56 | 63.3 |
Os07t0134000-02 | Rice | plasma membrane | 63.15 | 62.63 |
Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 61.28 | 60.29 |
VIT_07s0031g02440.t01 | Wine grape | plasma membrane | 42.03 | 59.01 |
VIT_18s0001g02020.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 58.39 | 58.63 |
VIT_04s0008g00230.t01 | Wine grape | plasma membrane | 52.8 | 53.68 |
VIT_10s0116g01380.t01 | Wine grape | plasma membrane | 49.9 | 53.2 |
VIT_04s0008g00240.t01 | Wine grape | plasma membrane | 52.38 | 53.15 |
VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 50.1 | 52.84 |
VIT_03s0038g02290.t01 | Wine grape | golgi, mitochondrion, peroxisome, plasma membrane | 54.87 | 51.76 |
VIT_04s0008g00280.t01 | Wine grape | plasma membrane | 50.72 | 51.15 |
VIT_07s0031g02340.t01 | Wine grape | peroxisome | 57.35 | 49.2 |
VIT_18s0041g01270.t01 | Wine grape | plasma membrane | 45.55 | 48.35 |
VIT_18s0041g01240.t01 | Wine grape | plasma membrane | 43.06 | 48.26 |
VIT_18s0041g01250.t01 | Wine grape | plasma membrane | 43.06 | 47.6 |
VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 46.38 | 47.46 |
VIT_04s0008g00250.t01 | Wine grape | plasma membrane | 48.65 | 39.83 |
Protein Annotations
EntrezGene:100257555 | wikigene:100257555 | MapMan:24.2.3.4.1 | InterPro:AA_transpt_TM | EMBL:AM440723 | ProteinID:CAN78472 |
ProteinID:CAN78472.1 | ProteinID:CBI19332 | ProteinID:CBI19332.3 | UniProt:E0CNV4 | EMBL:FN595227 | GO:GO:0003333 |
GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
GO:GO:0008150 | GO:GO:0015171 | GO:GO:0015172 | GO:GO:0015175 | GO:GO:0015804 | GO:GO:0015810 |
GO:GO:0015827 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100257555 | wikigene:LOC100257555 | PFAM:PF01490 |
PANTHER:PTHR22950 | PANTHER:PTHR22950:SF278 | TMHMM:TMhelix | UniParc:UPI0001985439 | ArrayExpress:VIT_18s0001g08270 | EnsemblPlantsGene:VIT_18s0001g08270 |
EnsemblPlants:VIT_18s0001g08270.t01 | unigene:Vvi.1508 | RefSeq:XP_002285557 | RefSeq:XP_002285557.1 | : | : |
Description
No Description!
Coordinates
chr18:+:6771411..6775121
Molecular Weight (calculated)
53483.3 Da
IEP (calculated)
8.675
GRAVY (calculated)
0.406
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNLSTNTL FVEQAPETIE KGDIGKNLDD DGRFKRTGTL LTASAHIITA VIGSGVLSLA WSISQLGWIA GPVVLVVFSF ITYFTSTLLA DCYRSPDPIT
101: GKRNYTYMDV VRANLGGMKV QLCGIAQYGN LIGVTIGYTI TASISMVAVR RSNCYHKHGH QAKCNPSDYP YMIIFACIQI VLSQIPNFHK LSWLSILAAV
201: MSFSYASIGI GLSIARVAGG AHARTTLTGR TVGVDLSSSE KVWRTFESIG NIAFAYAYST VLVEIQDTLK SSPPENKVMK KATFAGISTT SLFYVLCGCV
301: GYAAFGNDAP GNFLTGFGFF EPFWLIDLAN VFIAIHLIGA YQVFCQPVFG FVEKWCNKRW PESKFITTEH CIDVPLYGIY YLNLFRLVWR TVYVIVTAVL
401: AMLFPFFNEV MGFLGAASFW PLTVYFPIEM HIARTKIPKF SFTWTWLKIL SWTCLMVSVV AAAGSIQGLI KEIEKYKPFQ TQE
101: GKRNYTYMDV VRANLGGMKV QLCGIAQYGN LIGVTIGYTI TASISMVAVR RSNCYHKHGH QAKCNPSDYP YMIIFACIQI VLSQIPNFHK LSWLSILAAV
201: MSFSYASIGI GLSIARVAGG AHARTTLTGR TVGVDLSSSE KVWRTFESIG NIAFAYAYST VLVEIQDTLK SSPPENKVMK KATFAGISTT SLFYVLCGCV
301: GYAAFGNDAP GNFLTGFGFF EPFWLIDLAN VFIAIHLIGA YQVFCQPVFG FVEKWCNKRW PESKFITTEH CIDVPLYGIY YLNLFRLVWR TVYVIVTAVL
401: AMLFPFFNEV MGFLGAASFW PLTVYFPIEM HIARTKIPKF SFTWTWLKIL SWTCLMVSVV AAAGSIQGLI KEIEKYKPFQ TQE
001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
Arabidopsis Description
AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.