Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039735.1-P | Field mustard | plasma membrane | 89.81 | 91.91 |
| CDY46779 | Canola | plasma membrane | 89.61 | 89.98 |
| Solyc04g077050.2.1 | Tomato | plasma membrane | 77.75 | 77.75 |
| PGSC0003DMT400012730 | Potato | plasma membrane | 77.13 | 77.13 |
| KRH62133 | Soybean | plasma membrane | 76.51 | 76.83 |
| KRH52842 | Soybean | plasma membrane | 76.51 | 76.83 |
| VIT_18s0001g08270.t01 | Wine grape | plasma membrane | 74.01 | 73.71 |
| KRH04858 | Soybean | plasma membrane | 71.31 | 72.98 |
| AT1G58360.1 | Thale cress | cytosol, peroxisome, plasma membrane | 72.56 | 71.96 |
| PGSC0003DMT400030111 | Potato | plasma membrane | 72.56 | 71.52 |
| Solyc12g088190.1.1 | Tomato | plasma membrane | 71.73 | 70.7 |
| GSMUA_Achr4P32180_001 | Banana | plasma membrane | 67.57 | 67.57 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 67.57 | 67.29 |
| EER97947 | Sorghum | golgi, peroxisome, plasma membrane | 66.94 | 67.08 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 67.36 | 67.08 |
| TraesCS2D01G256000.1 | Wheat | plasma membrane | 67.36 | 67.08 |
| AT1G10010.2 | Thale cress | cytosol, peroxisome, plasma membrane | 65.7 | 66.39 |
| HORVU2Hr1G061190.4 | Barley | plasma membrane | 66.74 | 66.19 |
| Os07t0134000-02 | Rice | plasma membrane | 66.53 | 65.71 |
| Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 65.49 | 64.15 |
| AT1G77380.1 | Thale cress | plasma membrane | 57.59 | 58.19 |
| AT5G63850.1 | Thale cress | plasma membrane | 56.13 | 57.94 |
| AT5G09220.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.34 | 54.97 |
| AT1G44100.1 | Thale cress | plasma membrane | 54.68 | 54.79 |
| AT5G23810.1 | Thale cress | plasma membrane | 46.36 | 47.75 |
Protein Annotations
| MapMan:24.2.3.4.1 | EntrezGene:835025 | UniProt:A0A178UHU7 | Symbol:AAP6 | InterPro:AA_transpt_TM | ProteinID:AED95838.1 |
| EMBL:AK229102 | ArrayExpress:AT5G49630 | EnsemblPlantsGene:AT5G49630 | RefSeq:AT5G49630 | TAIR:AT5G49630 | RefSeq:AT5G49630-TAIR-G |
| EnsemblPlants:AT5G49630.1 | TAIR:AT5G49630.1 | ProteinID:BAA97227.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006865 | GO:GO:0008150 | GO:GO:0015172 |
| GO:GO:0015175 | GO:GO:0015293 | GO:GO:0015804 | GO:GO:0015810 | GO:GO:0015827 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_199774.1 | ProteinID:OAO92221.1 | UniProt:P92934 | PFAM:PF01490 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005352 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR22950 |
| PANTHER:PTHR22950:SF278 | TMHMM:TMhelix | UniParc:UPI0000048C35 | EMBL:X95736 | SEG:seg | : |
Description
AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
Coordinates
chr5:-:20142430..20146690
Molecular Weight (calculated)
53023.6 Da
IEP (calculated)
8.623
GRAVY (calculated)
0.372
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.