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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY63746 Canola extracellular, plasma membrane 63.66 85.11
Bra019967.1-P Field mustard plasma membrane 66.81 83.03
AT1G58360.1 Thale cress cytosol, peroxisome, plasma membrane 76.05 74.64
AT5G49630.1 Thale cress cytosol 66.39 65.7
EER97947 Sorghum golgi, peroxisome, plasma membrane 61.55 61.04
TraesCS2A01G268200.1 Wheat plasma membrane 61.76 60.87
TraesCS2D01G256000.1 Wheat plasma membrane 61.55 60.66
TraesCS2B01G266600.1 Wheat plasma membrane 61.13 60.25
HORVU2Hr1G061190.4 Barley plasma membrane 61.13 60.0
Os07t0134000-02 Rice plasma membrane 60.71 59.34
GSMUA_Achr4P32180_001 Banana plasma membrane 59.66 59.04
Zm00001d018751_P001 Maize cytosol, peroxisome, plasma membrane 60.29 58.45
AT1G77380.1 Thale cress plasma membrane 56.72 56.72
AT5G63850.1 Thale cress plasma membrane 54.2 55.36
AT1G44100.1 Thale cress plasma membrane 53.78 53.33
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 54.41 52.54
AT5G23810.1 Thale cress plasma membrane 50.0 50.96
Protein Annotations
ArrayExpress:AT1G10010EnsemblPlants:AT1G10010.2EnsemblPlantsGene:AT1G10010EntrezGene:837536GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF278PFAM:PF01490ProteinID:ANM60030.1
RefSeq:AT1G10010RefSeq:AT1G10010-TAIR-GRefSeq:NP_001322343.1SEG:segSymbol:AAP8TAIR:AT1G10010
TMHMM:TMhelixUnigene:At.51545UniParc:UPI000848E056UniProt:A0A1P8ATS1MapMan:24.2.3.4.1:
Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
Coordinates
chr1:+:3265886..3268823
Molecular Weight (calculated)
51949.5 Da
IEP (calculated)
9.164
GRAVY (calculated)
0.480
Length
476 amino acids
Sequence
(BLAST)
001: MMDAYNNPSA VESGDAAVKS VDDDGREKRT GTFWTASAHI ITAVIGSGVL SLAWAIAQLG WVAGTTVLVA FAIITYYTST LLADCYRSPD SITGTRNYNY
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.