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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97947 Sorghum golgi, peroxisome, plasma membrane 90.83 92.92
HORVU2Hr1G061190.4 Barley plasma membrane 82.69 83.71
TraesCS2D01G256000.1 Wheat plasma membrane 82.28 83.64
TraesCS2B01G266600.1 Wheat plasma membrane 82.28 83.64
TraesCS2A01G268200.1 Wheat plasma membrane 82.08 83.44
Os07t0134000-02 Rice plasma membrane 79.43 80.08
GSMUA_Achr4P32180_001 Banana plasma membrane 70.26 71.73
KRH62133 Soybean plasma membrane 66.8 68.48
KRH52842 Soybean plasma membrane 66.19 67.85
Bra039735.1-P Field mustard plasma membrane 64.15 67.02
PGSC0003DMT400012730 Potato plasma membrane 65.58 66.94
Solyc04g077050.2.1 Tomato plasma membrane 65.17 66.53
Solyc01g106800.2.1 Tomato plasma membrane 62.32 65.81
CDY46779 Canola plasma membrane 64.15 65.76
AT5G49630.1 Thale cress cytosol 64.15 65.49
KRH04858 Soybean plasma membrane 61.51 64.26
PGSC0003DMT400030111 Potato plasma membrane 61.51 61.89
Solyc12g088190.1.1 Tomato plasma membrane 61.1 61.48
CDY48843 Canola cytosol, peroxisome, plasma membrane 59.88 61.38
VIT_18s0001g08270.t01 Wine grape plasma membrane 60.29 61.28
AT1G58360.1 Thale cress cytosol, peroxisome, plasma membrane 60.49 61.24
CDY53793 Canola cytosol, peroxisome, plasma membrane 59.67 61.17
Bra027868.1-P Field mustard cytosol, peroxisome, plasma membrane 59.67 61.17
CDY49542 Canola plasma membrane 25.66 61.16
CDY63746 Canola extracellular, plasma membrane 44.2 60.96
KRH35634 Soybean plasma membrane 57.03 60.61
CDY04349 Canola cytosol, peroxisome, plasma membrane 59.67 60.54
AT1G10010.2 Thale cress cytosol, peroxisome, plasma membrane 58.45 60.29
CDY57931 Canola plasma membrane 55.4 58.37
CDY57932 Canola plasma membrane 54.79 58.23
Bra031697.1-P Field mustard plasma membrane 56.82 58.12
CDY22607 Canola plasma membrane 56.82 58.0
CDY60248 Canola cytosol, peroxisome, plasma membrane 59.88 57.99
CDY44564 Canola cytosol, peroxisome, plasma membrane 59.88 57.99
Bra035446.1-P Field mustard cytosol, peroxisome, plasma membrane 59.88 57.99
Bra019967.1-P Field mustard plasma membrane 45.01 57.7
Bra031696.1-P Field mustard plasma membrane 33.2 57.39
CDY22609 Canola plasma membrane 56.01 57.17
Bra019969.1-P Field mustard plasma membrane 51.12 57.05
CDY62728 Canola plasma membrane 55.8 56.85
Zm00001d053143_P002 Maize plasma membrane 54.58 56.78
CDY53831 Canola plasma membrane 55.6 56.76
Bra031695.1-P Field mustard plasma membrane 53.56 56.56
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 55.4 56.43
Zm00001d010231_P001 Maize plasma membrane 54.79 56.28
Zm00001d023603_P001 Maize plasma membrane 42.36 56.22
Zm00001d023593_P001 Maize plasma membrane 54.58 56.18
Zm00001d023592_P001 Maize plasma membrane 54.18 55.42
Zm00001d046235_P002 Maize plasma membrane 53.16 55.41
CDY62727 Canola cytosol, peroxisome, plasma membrane 52.75 55.22
CDY22608 Canola plasma membrane 56.01 54.56
Zm00001d042619_P002 Maize plasma membrane 54.58 54.25
Zm00001d036984_P001 Maize plasma membrane 51.53 53.94
Zm00001d046263_P001 Maize peroxisome 53.36 53.91
Bra017905.1-P Field mustard peroxisome 59.27 53.69
Zm00001d004705_P001 Maize plasma membrane 49.49 53.52
CDY04448 Canola peroxisome 58.86 53.52
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 54.99 52.63
Zm00001d012229_P001 Maize plasma membrane 48.47 51.63
Zm00001d050211_P001 Maize peroxisome 46.44 50.22
Zm00001d042636_P002 Maize plasma membrane 47.66 50.0
Zm00001d003343_P001 Maize plasma membrane 46.23 49.56
Zm00001d035243_P001 Maize plasma membrane 46.84 47.52
Zm00001d012231_P002 Maize plasma membrane 47.05 46.11
Zm00001d041836_P001 Maize plasma membrane 31.36 45.97
Zm00001d017880_P006 Maize plasma membrane 40.33 40.33
Zm00001d001984_P001 Maize mitochondrion 44.6 39.46
Bra019968.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 39.1 36.78
Zm00001d025665_P002 Maize plasma membrane 46.64 31.16
CDY53832 Canola plasma membrane 56.82 26.47
Protein Annotations
EnsemblPlants:Zm00001d018751_P001EnsemblPlants:Zm00001d018751_T001EnsemblPlantsGene:Zm00001d018751GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF278PFAM:PF01490ProteinID:ONM51229.1SEG:seg
TMHMM:TMhelixUniParc:UPI0001D841EBUniProt:A0A1D6HRX6MapMan:24.2.3.4.1::
Description
Amino acid permease 6
Coordinates
chr7:-:4195129..4197386
Molecular Weight (calculated)
53045.4 Da
IEP (calculated)
8.678
GRAVY (calculated)
0.469
Length
491 amino acids
Sequence
(BLAST)
001: MVSERQQAAG KVAAFNLTEA GFGDGSDLLD DDGRERRTGT LVTASAHIIT AVIGSGVLSL AWAIAQLGWV IGPVVLLAFS AITWFCSSLL ADCYRAPPGP
101: GQGKRNYTYG QAVRSYLGES KYRLCSLAQY VNLVGVTIGY TITTAISMGA IKRSNCFHSR GHGADCEASN TTNMIIFAGI QILLSQLPNF HKLWWLSIVA
201: AVMSLAYSSI GLGLSIAKIA GKLMHGSYCG VHVKTSLTGA AVGVDVTAAE KVWKTFQSLG DIAFAYTYSN VLIEIQDTLR SSPPENVVMK KASFIGVSTT
301: TAFYMLCGVL GYAAFGSDAP GNFLTGFGFY DPFWLIDVGN VCIAVHLVGA YQVFCQPIYQ FVEAWARGRW PDCAFLHAEL AVVAGSSFTA SPFRLVWRTA
401: YVVLTALVAT VFPFFNDFLG LIGAVSFWPL TVYFPIQMYM AQAKTRRFSP AWTWMNVLSY ACLFVSLLAA AGSVQGLVKD LKGYKPLFKV S
Best Arabidopsis Sequence Match ( AT5G49630.1 )
(BLAST)
001: MEKKKSMFVE QSFPEHEIGD TNKNFDEDGR DKRTGTWMTG SAHIITAVIG SGVLSLAWAI AQLGWVAGPA VLMAFSFITY FTSTMLADCY RSPDPVTGKR
101: NYTYMEVVRS YLGGRKVQLC GLAQYGNLIG ITIGYTITAS ISMVAVKRSN CFHKNGHNVK CATSNTPFMI IFAIIQIILS QIPNFHNLSW LSILAAVMSF
201: CYASIGVGLS IAKAAGGGEH VRTTLTGVTV GIDVSGAEKI WRTFQAIGDI AFAYAYSTVL IEIQDTLKAG PPSENKAMKR ASLVGVSTTT FFYMLCGCVG
301: YAAFGNDAPG NFLTGFGFYE PFWLIDFANV CIAVHLIGAY QVFCQPIFQF VESQSAKRWP DNKFITGEYK IHVPCCGDFS INFLRLVWRT SYVVVTAVVA
401: MIFPFFNDFL GLIGAASFWP LTVYFPIEMH IAQKKIPKFS FTWTWLKILS WTCFIVSLVA AAGSVQGLIQ SLKDFKPFQA P
Arabidopsis Description
AAP6AAP6 [Source:UniProtKB/TrEMBL;Acc:A0A178UHU7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.