Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87977 | Sorghum | plasma membrane | 93.59 | 93.99 |
| Os01t0878400-01 | Rice | plasma membrane | 86.97 | 87.53 |
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 86.75 | 86.38 |
| TraesCS3A01G388100.1 | Wheat | plasma membrane | 86.75 | 86.2 |
| TraesCS3D01G381400.1 | Wheat | plasma membrane | 86.75 | 86.2 |
| Zm00001d012231_P002 | Maize | plasma membrane | 91.24 | 85.23 |
| HORVU3Hr1G081610.2 | Barley | peroxisome, plasma membrane | 86.11 | 76.76 |
| Zm00001d035243_P001 | Maize | plasma membrane | 60.68 | 58.68 |
| Zm00001d012229_P001 | Maize | plasma membrane | 56.62 | 57.48 |
| Zm00001d041836_P001 | Maize | plasma membrane | 41.03 | 57.31 |
| Zm00001d023592_P001 | Maize | plasma membrane | 52.14 | 50.83 |
| Zm00001d053143_P002 | Maize | plasma membrane | 50.64 | 50.21 |
| Zm00001d023603_P001 | Maize | plasma membrane | 39.53 | 50.0 |
| Zm00001d010231_P001 | Maize | plasma membrane | 51.07 | 50.0 |
| Zm00001d023596_P001 | Maize | cytosol, peroxisome, plasma membrane | 51.07 | 49.59 |
| Zm00001d023593_P001 | Maize | plasma membrane | 50.43 | 49.48 |
| Zm00001d046235_P002 | Maize | plasma membrane | 49.15 | 48.83 |
| Zm00001d036984_P001 | Maize | plasma membrane | 48.93 | 48.83 |
| Zm00001d046263_P001 | Maize | peroxisome | 50.0 | 48.15 |
| Zm00001d003343_P001 | Maize | plasma membrane | 46.79 | 47.82 |
| Zm00001d018751_P001 | Maize | cytosol, peroxisome, plasma membrane | 50.0 | 47.66 |
| Zm00001d042619_P002 | Maize | plasma membrane | 50.0 | 47.37 |
| Zm00001d041842_P002 | Maize | mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 51.07 | 46.59 |
| Zm00001d004705_P001 | Maize | plasma membrane | 45.09 | 46.48 |
| Zm00001d050211_P001 | Maize | peroxisome | 45.09 | 46.48 |
| Zm00001d017880_P006 | Maize | plasma membrane | 43.8 | 41.75 |
| Zm00001d001984_P001 | Maize | mitochondrion | 45.09 | 38.02 |
| Zm00001d025665_P002 | Maize | plasma membrane | 49.15 | 31.29 |
Protein Annotations
| EMBL:BT063620 | EnsemblPlants:Zm00001d042636_P002 | EnsemblPlants:Zm00001d042636_T002 | EnsemblPlantsGene:Zm00001d042636 | EntrezGene:100382244 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF257 | PFAM:PF01490 |
| ProteinID:ONM35918.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001948CDC | UniProt:C0P5Q1 | MapMan:24.2.3.4.1 |
Description
Amino acid permease 6
Coordinates
chr3:+:174783851..174785941
Molecular Weight (calculated)
50068.2 Da
IEP (calculated)
8.754
GRAVY (calculated)
0.541
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKSAVAAYD VERGDYEEEH ERRGTVWTAT AHIVTAVIGS GVLALAWSVA QLGWVAGTLA LAGFACVTYY TSTLLANAYR APHPVTGDRN RTYMDAVRSY
101: LSPREVFMCG IAQYVNLWGT MVGYTITATI SMAAIRQSNC FRRSGAGAHC DAPGTVLMLA FGVVQVVLSQ FPGLEHITWL SVVAAVMSFA YSFIGLGLSV
201: GQWVSHGGGL GGRIAGAAAA SPTRKLWNVL LALGNIAFAY TFAEVLIEIQ DTLKSPPPEN RTMKKAAMYG IGATTIFYIS VGCAGYAAFG SDAPGNILTA
301: GGLGPFWLVD IANMCLILHL IGAYQVYAQP IFASVERWAA SRWPEAKFIS SAYTVSIPLM QRGSVTVAPY KLVLRTVLVA ATTVVALMIP FFNAVLGLLG
401: AFSFWPLTVY FPISMHIAQD KITRGTKWYL LQALSMVCLM ISVAVGIGSV TDIVDSLKVS SNPLKTVS
101: LSPREVFMCG IAQYVNLWGT MVGYTITATI SMAAIRQSNC FRRSGAGAHC DAPGTVLMLA FGVVQVVLSQ FPGLEHITWL SVVAAVMSFA YSFIGLGLSV
201: GQWVSHGGGL GGRIAGAAAA SPTRKLWNVL LALGNIAFAY TFAEVLIEIQ DTLKSPPPEN RTMKKAAMYG IGATTIFYIS VGCAGYAAFG SDAPGNILTA
301: GGLGPFWLVD IANMCLILHL IGAYQVYAQP IFASVERWAA SRWPEAKFIS SAYTVSIPLM QRGSVTVAPY KLVLRTVLVA ATTVVALMIP FFNAVLGLLG
401: AFSFWPLTVY FPISMHIAQD KITRGTKWYL LQALSMVCLM ISVAVGIGSV TDIVDSLKVS SNPLKTVS
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.