Factsheet for Zm00001d046235_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76565	Sorghum	plasma membrane	92.14	91.56
TraesCS7D01G366000.1	Wheat	plasma membrane	82.17	85.05
HORVU7Hr1G088510.2	Barley	plasma membrane	81.53	83.66
Zm00001d036984_P001	Maize	plasma membrane	75.8	76.12
Zm00001d046263_P001	Maize	peroxisome	65.82	63.79
GSMUA_Achr10P...	Banana	plasma membrane	60.72	62.86
Zm00001d010231_P001	Maize	plasma membrane	56.9	56.07
Zm00001d053143_P002	Maize	plasma membrane	55.84	55.72
Zm00001d023593_P001	Maize	plasma membrane	56.05	55.35
Zm00001d023592_P001	Maize	plasma membrane	56.05	55.0
Zm00001d023596_P001	Maize	cytosol, peroxisome, plasma membrane	55.41	54.15
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	55.41	53.16
Zm00001d023603_P001	Maize	plasma membrane	41.4	52.7
Zm00001d004705_P001	Maize	plasma membrane	50.74	52.64
Zm00001d042619_P002	Maize	plasma membrane	54.35	51.82
KRH04869	Soybean	peroxisome, plasma membrane, vacuole	51.59	51.81
Zm00001d041842_P002	Maize	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	56.05	51.46
Zm00001d050211_P001	Maize	peroxisome	49.26	51.1
KRH52799	Soybean	plasma membrane	50.96	50.96
KRH62110	Soybean	plasma membrane	50.53	50.53
VIT_04s0008g00240.t01	Wine grape	plasma membrane	50.53	50.0
VIT_04s0008g00230.t01	Wine grape	plasma membrane	50.32	49.89
KRH52796	Soybean	plasma membrane	49.26	49.36
Zm00001d003343_P001	Maize	plasma membrane	47.98	49.34
Zm00001d012229_P001	Maize	plasma membrane	48.2	49.24
Zm00001d042636_P002	Maize	plasma membrane	48.83	49.15
VIT_04s0008g00280.t01	Wine grape	plasma membrane	49.89	49.06
KRH16264	Soybean	plasma membrane	48.41	48.31
KRH16269	Soybean	plasma membrane	45.01	46.09
Zm00001d035243_P001	Maize	plasma membrane	46.71	45.45
Zm00001d041836_P001	Maize	plasma membrane	31.85	44.78
Zm00001d012231_P002	Maize	plasma membrane	47.35	44.51
Zm00001d017880_P006	Maize	plasma membrane	43.31	41.55
VIT_04s0008g00250.t01	Wine grape	plasma membrane	50.11	40.0
Zm00001d001984_P001	Maize	mitochondrion	46.28	39.28
Zm00001d025665_P002	Maize	plasma membrane	49.26	31.56

Protein Annotations

EMBL:BT043110	EMBL:EU963574	EnsemblPlants:Zm00001d046235_P002	EnsemblPlants:Zm00001d046235_T002	EnsemblPlantsGene:Zm00001d046235	EntrezGene:100283143
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF302
PFAM:PF01490	ProteinID:AQL03946.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0000E64A54	UniProt:B4G172
MapMan:24.2.3.4.1	:	:	:	:	:

Description

Amino acid permease 6

Coordinates

chr9:+:74050935..74055719

Molecular Weight (calculated)

51284.5 Da

IEP (calculated)

8.516

GRAVY (calculated)

0.508

Length

471 amino acids

Sequence
(BLAST)

001: MVGAMRGGAM ELEDRLATLP RFRGDHDDDG KERRTGTVWT ATAHIITAVI GSGVLSLAWA MAQLGWVAGP LTLVLFAAIT FYTCGLLADC YRVGDPVTGK
101: RNYTYTEAVK SNLGGWYVWF CGFCQYVNMF GTGIGYTITA SISAAAINKS NCFHWHGHDA DCSQNTSAYI IGFGVVQVIF SQLHNFHKLW WLSIIAAIMS
201: FSYSAIAVGL SLAQIVMGPT GKTTMTGTLV GVDVDAAQKV WMTFQALGNV AFAYSYAIIL IEIQDTLRSP PAENKTMRRA TMMGISTTTG FYMLCGCLGY
301: AAFGNAASGN ILTGFGFYEP FWLVDFANAC IVVHLVGGFQ VFCQPLFAAV EGAVAARYPG STREYGAAGL NVFRLVWRTA FVAVITLLAI LMPFFNSILG
401: ILGSIAFWPL TVFFPVEMYI RQRQVRRFST KWIALQSLSF VCFLVTAASC AASVQGVVDS LKTYVPFKTR S

Best Arabidopsis Sequence Match ( AT1G58360.1 )
(BLAST)

001: MKSFNTEGHN HSTAESGDAY TVSDPTKNVD EDGREKRTGT WLTASAHIIT AVIGSGVLSL AWAIAQLGWI AGTSILLIFS FITYFTSTML ADCYRAPDPV
101: TGKRNYTYMD VVRSYLGGRK VQLCGVAQYG NLIGVTVGYT ITASISLVAV GKSNCFHDKG HTADCTISNY PYMAVFGIIQ VILSQIPNFH KLSFLSIMAA
201: VMSFTYATIG IGLAIATVAG GKVGKTSMTG TAVGVDVTAA QKIWRSFQAV GDIAFAYAYA TVLIEIQDTL RSSPAENKAM KRASLVGVST TTFFYILCGC
301: IGYAAFGNNA PGDFLTDFGF FEPFWLIDFA NACIAVHLIG AYQVFAQPIF QFVEKKCNRN YPDNKFITSE YSVNVPFLGK FNISLFRLVW RTAYVVITTV
401: VAMIFPFFNA ILGLIGAASF WPLTVYFPVE MHIAQTKIKK YSARWIALKT MCYVCLIVSL LAAAGSIAGL ISSVKTYKPF RTMHE

Arabidopsis Description

AAP1NAT2 [Source:UniProtKB/TrEMBL;Acc:A0A178WEG7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.