Factsheet for Zm00001d041836_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15803	Sorghum	plasma membrane	83.88	58.42
Zm00001d035243_P001	Maize	plasma membrane	82.69	57.23
Os12t0194900-01	Rice	cytosol, peroxisome, plasma membrane	78.21	55.98
TraesCS5B01G120800.1	Wheat	plasma membrane	75.22	54.43
TraesCSU01G134900.1	Wheat	plasma membrane	75.22	54.43
HORVU5Hr1G029060.1	Barley	cytosol, peroxisome, plasma membrane	75.82	54.39
TraesCS5A01G115800.2	Wheat	plasma membrane	74.93	54.21
GSMUA_Achr9P08360_001	Banana	plasma membrane	65.07	47.08
GSMUA_Achr6P29090_001	Banana	mitochondrion, plasma membrane	63.58	43.12
Zm00001d042636_P002	Maize	plasma membrane	57.31	41.03
TraesCS6D01G363900.1	Wheat	plasma membrane	52.54	38.94
Zm00001d012231_P002	Maize	plasma membrane	56.72	37.92
Zm00001d012229_P001	Maize	plasma membrane	51.94	37.74
Os06t0228800-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	56.42	37.28
Zm00001d050211_P001	Maize	peroxisome	48.06	35.46
Zm00001d042619_P002	Maize	plasma membrane	48.06	32.59
Zm00001d053143_P002	Maize	plasma membrane	45.67	32.42
Zm00001d003343_P001	Maize	plasma membrane	44.18	32.31
Zm00001d046263_P001	Maize	peroxisome	46.87	32.3
Zm00001d010231_P001	Maize	plasma membrane	45.97	32.22
Zm00001d004705_P001	Maize	plasma membrane	43.58	32.16
Zm00001d023596_P001	Maize	cytosol, peroxisome, plasma membrane	46.27	32.16
Zm00001d023592_P001	Maize	plasma membrane	45.97	32.08
Zm00001d046235_P002	Maize	plasma membrane	44.78	31.85
Zm00001d023593_P001	Maize	plasma membrane	45.07	31.66
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	45.97	31.36
Zm00001d041842_P002	Maize	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	47.16	30.8
Zm00001d036984_P001	Maize	plasma membrane	42.69	30.49
Zm00001d023603_P001	Maize	plasma membrane	32.54	29.46
Zm00001d017880_P006	Maize	plasma membrane	37.91	25.87
Zm00001d001984_P001	Maize	mitochondrion	40.0	24.14
Zm00001d025665_P002	Maize	plasma membrane	44.78	20.41

Protein Annotations

EnsemblPlants:Zm00001d041836_P001	EnsemblPlants:Zm00001d041836_T001	EnsemblPlantsGene:Zm00001d041836	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF241	PFAM:PF01490	ProteinID:ONM33799.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002207BF2	UniProt:A0A1D6MYM4	MapMan:24.2.3.4.1	:	:

Description

Amino acid permease 6

Coordinates

chr3:+:139918883..139920424

Molecular Weight (calculated)

36554.6 Da

IEP (calculated)

8.862

GRAVY (calculated)

0.433

Length

335 amino acids

Sequence
(BLAST)

001: MSDDRRTVAY DAEAGDGHER QAGTVWTATS HIVAVVAGSG VLALPWTVAQ LGWVLGPLVL VGFSCVTYYT SALLADCYRY PDPVHGAVVN RQYVDAVRCY
101: LVREPMGHSR RLHHHRQRQH DAMKRASFYG LGAATAFYLA LGCAGYAAFG DDAPGNVLTG FAFHEPSWLV DAANACVVVH LVGAYQVFAQ PIFARLESCA
201: ACRWPDAKLV NATYYVRVPP FLLRSASSPP TVAVAPLKLV LRTIVIMFTT LVAMLLPFFN AVLGLIGALG FWPLSVYFPV SMHMARLNIR RGELRWWALQ
301: AMSFVCLLVS IGASIGSVQD IVHNLKAAVP FKTVN

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.