Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G134900.1 | Wheat | plasma membrane | 99.78 | 99.78 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 98.92 | 98.92 |
| HORVU5Hr1G029060.1 | Barley | cytosol, peroxisome, plasma membrane | 98.49 | 97.64 |
| Os12t0194900-01 | Rice | cytosol, peroxisome, plasma membrane | 88.12 | 87.18 |
| EES15803 | Sorghum | plasma membrane | 88.12 | 84.82 |
| Zm00001d035243_P001 | Maize | plasma membrane | 85.31 | 81.61 |
| Zm00001d041836_P001 | Maize | plasma membrane | 54.21 | 74.93 |
| GSMUA_Achr9P08360_001 | Banana | plasma membrane | 74.73 | 74.73 |
| GSMUA_Achr6P29090_001 | Banana | mitochondrion, plasma membrane | 72.57 | 68.02 |
| TraesCS3A01G388100.1 | Wheat | plasma membrane | 61.12 | 60.08 |
| TraesCS3A01G388000.2 | Wheat | plasma membrane | 51.4 | 51.52 |
| TraesCS2A01G470200.1 | Wheat | plasma membrane | 27.21 | 49.41 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 50.76 | 48.65 |
| TraesCS7A01G194500.1 | Wheat | plasma membrane | 49.68 | 48.63 |
| TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.68 | 48.52 |
| TraesCS7A01G188200.1 | Wheat | peroxisome | 49.89 | 47.73 |
| TraesCS7A01G356600.1 | Wheat | golgi, peroxisome, plasma membrane | 50.54 | 47.56 |
| TraesCS3A01G406800.1 | Wheat | plasma membrane | 47.95 | 47.54 |
| TraesCS4A01G215300.1 | Wheat | plasma membrane | 49.68 | 47.33 |
| TraesCS3A01G406900.1 | Wheat | plasma membrane | 48.16 | 46.46 |
| TraesCS2A01G331100.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.65 | 46.45 |
| TraesCS3A01G407000.1 | Wheat | plasma membrane | 47.95 | 46.25 |
| TraesCS5A01G115100.1 | Wheat | plasma membrane | 47.73 | 46.14 |
| TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 48.6 | 45.82 |
| TraesCS6A01G285300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 45.36 | 44.97 |
| TraesCS3A01G065600.1 | Wheat | plasma membrane | 43.84 | 44.13 |
| TraesCS6A01G285200.1 | Wheat | golgi, peroxisome, plasma membrane | 43.63 | 43.16 |
| TraesCS2A01G499800.1 | Wheat | plasma membrane | 42.33 | 40.41 |
| TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 33.69 | 30.35 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G115800.2 | EnsemblPlantsGene:TraesCS5A01G115800 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF241 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:235243550..235245972
Molecular Weight (calculated)
50353.5 Da
IEP (calculated)
8.611
GRAVY (calculated)
0.508
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMERRSVVY DSEGGDDHER QGTVWTATSH IVAAVVGSGV LALAWTVAQL GWVVGPLVLL GFSCVTYYTS TLLANCYRYP DPVSGAVNRE YIDAVRCYLG
101: RKNVLLCGCA QYVNLWGTLV GYTITASTSM VAVKRVNCFH RSGFSTTGCN SSGSTYMVLF GLMQLLLSQL PSLHNIAWLS VVAVATSFGY SFISLGLCAA
201: KWASHGDVRG TLAGASVDAP RDKAFNVLLA LGNIAFSYTF ADVLIEIQDT LKSPPAENKT MKRASLYGLS MTTVFYLLLG CTGYAAFGND APGNILTGLA
301: FYEPYWLVDV ANVCVIVHLA GAYQVFAQPI FARLESYVAC RWPDAKIINA TYYARVPGRP SSSVPVAPLK LVLRTVIIMF TTLVAMLLPF FNAVLGLIGA
401: LGFWPLSVYF PVSMHIARLK IRRGEGRWYW LQAMSFVCLL ISLAASIGSV QDIVHNLKTA TPF
101: RKNVLLCGCA QYVNLWGTLV GYTITASTSM VAVKRVNCFH RSGFSTTGCN SSGSTYMVLF GLMQLLLSQL PSLHNIAWLS VVAVATSFGY SFISLGLCAA
201: KWASHGDVRG TLAGASVDAP RDKAFNVLLA LGNIAFSYTF ADVLIEIQDT LKSPPAENKT MKRASLYGLS MTTVFYLLLG CTGYAAFGND APGNILTGLA
301: FYEPYWLVDV ANVCVIVHLA GAYQVFAQPI FARLESYVAC RWPDAKIINA TYYARVPGRP SSSVPVAPLK LVLRTVIIMF TTLVAMLLPF FNAVLGLIGA
401: LGFWPLSVYF PVSMHIARLK IRRGEGRWYW LQAMSFVCLL ISLAASIGSV QDIVHNLKTA TPF
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.