Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 99.58 | 99.79 |
| TraesCS3D01G381400.1 | Wheat | plasma membrane | 99.58 | 99.58 |
| HORVU3Hr1G081610.2 | Barley | peroxisome, plasma membrane | 98.09 | 88.0 |
| Os01t0878400-01 | Rice | plasma membrane | 86.84 | 87.96 |
| OQU87977 | Sorghum | plasma membrane | 86.62 | 87.55 |
| Zm00001d042636_P002 | Maize | plasma membrane | 86.2 | 86.75 |
| Zm00001d012231_P002 | Maize | plasma membrane | 83.65 | 78.64 |
| TraesCS5A01G115800.2 | Wheat | plasma membrane | 60.08 | 61.12 |
| TraesCS3A01G388000.2 | Wheat | plasma membrane | 54.78 | 55.84 |
| TraesCS7A01G194500.1 | Wheat | plasma membrane | 49.89 | 49.68 |
| TraesCS5A01G115100.1 | Wheat | plasma membrane | 49.89 | 49.06 |
| TraesCS2A01G470200.1 | Wheat | plasma membrane | 26.54 | 49.02 |
| TraesCS2A01G268200.1 | Wheat | plasma membrane | 49.68 | 48.45 |
| TraesCS4A01G215300.1 | Wheat | plasma membrane | 49.89 | 48.35 |
| TraesCS7A01G188200.1 | Wheat | peroxisome | 49.04 | 47.73 |
| TraesCS3A01G406800.1 | Wheat | plasma membrane | 47.13 | 47.54 |
| TraesCS5A01G113300.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.56 | 47.26 |
| TraesCS3A01G406900.1 | Wheat | plasma membrane | 47.56 | 46.67 |
| TraesCS2A01G331100.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.86 | 46.45 |
| TraesCS3A01G407000.1 | Wheat | plasma membrane | 46.92 | 46.04 |
| TraesCS1A01G264500.1 | Wheat | golgi, peroxisome, plasma membrane | 47.98 | 46.03 |
| TraesCS7A01G356600.1 | Wheat | golgi, peroxisome, plasma membrane | 47.98 | 45.94 |
| TraesCS6A01G285300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 45.44 | 45.82 |
| TraesCS6A01G285200.1 | Wheat | golgi, peroxisome, plasma membrane | 42.04 | 42.31 |
| TraesCS3A01G065600.1 | Wheat | plasma membrane | 39.7 | 40.65 |
| TraesCS2A01G499800.1 | Wheat | plasma membrane | 41.83 | 40.62 |
| TraesCS2A01G348600.2 | Wheat | cytosol, plasma membrane, vacuole | 31.42 | 28.79 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G388100.1 | EnsemblPlantsGene:TraesCS3A01G388100 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF257 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:637110114..637112125
Molecular Weight (calculated)
50138.2 Da
IEP (calculated)
8.006
GRAVY (calculated)
0.558
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKHAAADAA AAAAAAEDVE TGEHERKGTV WTATAHIVTA VIGSGVLALA WSVAQLGWVA GPLALVGFAC VTYYTSTLLA NAYRAPDPVT GARNHTYTDA
101: VRSYLSPREV FMCGIAQYGN LWGTMVGYTI TATISMVAIR RSDCVHENGQ GARCDAPGTV LMLAFTVVQV VLSQFPGLEH ITWLSVVAAV MSFAYSFIGL
201: ALSVTEWASH GLRPDGRIAG ATAASSSKKT WDVLLALGNI AFAYTFAEVL IEIQDTLKSP PSEHKTMKKA AMYGIGATTI FYISVGCAGY AAFGSDAPGN
301: ILTAPGLGPF WLVDIANMCL ILHLIGAYQV YAQPIFATAE RWIVSRWPDT KFISSACTVS IPLMQRGSVT VAPYKLVLRT VIVIATTVVA MMIPFFNAVL
401: GLLGAFSFWP LTVYFPISMH IAQGKITKGT KWYLLQGLSM VCLMISVAVG IGSVSDIVDS LKVSTPFKTV S
101: VRSYLSPREV FMCGIAQYGN LWGTMVGYTI TATISMVAIR RSDCVHENGQ GARCDAPGTV LMLAFTVVQV VLSQFPGLEH ITWLSVVAAV MSFAYSFIGL
201: ALSVTEWASH GLRPDGRIAG ATAASSSKKT WDVLLALGNI AFAYTFAEVL IEIQDTLKSP PSEHKTMKKA AMYGIGATTI FYISVGCAGY AAFGSDAPGN
301: ILTAPGLGPF WLVDIANMCL ILHLIGAYQV YAQPIFATAE RWIVSRWPDT KFISSACTVS IPLMQRGSVT VAPYKLVLRT VIVIATTVVA MMIPFFNAVL
401: GLLGAFSFWP LTVYFPISMH IAQGKITKGT KWYLLQGLSM VCLMISVAVG IGSVSDIVDS LKVSTPFKTV S
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.