Factsheet for TraesCS3A01G065600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G406800.1	Wheat	plasma membrane	60.22	59.31
TraesCS3A01G406900.1	Wheat	plasma membrane	60.43	57.92
TraesCS3A01G407000.1	Wheat	plasma membrane	60.22	57.71
TraesCS1A01G264500.1	Wheat	golgi, peroxisome, plasma membrane	59.35	55.6
PGSC0003DMT400030727	Potato	plasma membrane	56.3	54.76
GSMUA_Achr3P02860_001	Banana	peroxisome, plasma membrane, vacuole	53.04	54.59
Solyc06g060110.2.1	Tomato	plasma membrane	55.87	54.56
GSMUA_Achr2P20670_001	Banana	plasma membrane	51.96	54.2
TraesCS2A01G470200.1	Wheat	plasma membrane	29.78	53.73
PGSC0003DMT400015426	Potato	plasma membrane	55.87	53.65
Bra015673.1-P	Field mustard	plasma membrane	55.43	53.57
CDX88364	Canola	plasma membrane	55.0	53.15
CDX87522	Canola	plasma membrane	55.0	53.15
AT1G77380.1	Thale cress	plasma membrane	54.78	52.94
TraesCS5A01G115100.1	Wheat	plasma membrane	55.0	52.82
CDX88365	Canola	plasma membrane	54.57	52.73
GSMUA_Achr6P12890_001	Banana	peroxisome, plasma membrane, vacuole	55.43	52.58
Solyc11g005070.1.1	Tomato	plasma membrane	54.35	52.52
KRH16402	Soybean	plasma membrane	54.57	52.4
AT5G63850.1	Thale cress	plasma membrane	53.04	52.36
TraesCS4A01G215300.1	Wheat	plasma membrane	55.22	52.26
CDY36017	Canola	plasma membrane	54.57	52.18
Bra024241.1-P	Field mustard	plasma membrane	52.83	52.15
CDY60629	Canola	plasma membrane	46.96	52.05
CDY43761	Canola	plasma membrane	52.61	51.93
Bra029199.1-P	Field mustard	plasma membrane	52.61	51.93
KRH17988	Soybean	plasma membrane	53.91	51.77
Bra014020.1-P	Field mustard	plasma membrane	54.13	51.77
KRH64623	Soybean	cytosol, peroxisome, plasma membrane	54.78	51.75
CDX84450	Canola	plasma membrane	52.39	51.72
CDY47793	Canola	plasma membrane	53.48	51.68
AT1G44100.1	Thale cress	plasma membrane	53.91	51.67
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	53.91	51.56
Bra032199.1-P	Field mustard	plasma membrane	54.57	51.54
CDY43854	Canola	plasma membrane	54.57	51.54
CDY31348	Canola	plasma membrane	52.17	51.5
CDY14972	Canola	plasma membrane	53.26	51.47
Bra036939.1-P	Field mustard	plasma membrane	53.26	51.47
CDY39844	Canola	plasma membrane	51.96	51.29
TraesCS5A01G113300.1	Wheat	cytosol, peroxisome, plasma membrane	52.83	51.27
KRH53283	Soybean	golgi, peroxisome, plasma membrane	54.13	51.13
GSMUA_Achr10P...	Banana	plasma membrane	46.3	51.08
CDX69918	Canola	plasma membrane	53.26	50.52
CDY21569	Canola	plasma membrane	53.26	50.52
VIT_10s0116g01380.t01	Wine grape	plasma membrane	49.57	50.33
Bra009371.1-P	Field mustard	plasma membrane	53.04	50.31
CDX78353	Canola	plasma membrane	53.04	50.1
AT5G09220.1	Thale cress	cytosol, peroxisome, plasma membrane	53.7	50.1
Bra006016.1-P	Field mustard	plasma membrane	52.83	49.9
CDX81121	Canola	plasma membrane	52.83	49.9
CDY71454	Canola	golgi, peroxisome, plasma membrane	30.22	49.64
TraesCS7A01G188200.1	Wheat	peroxisome	52.17	49.59
TraesCS7A01G356600.1	Wheat	golgi, peroxisome, plasma membrane	52.39	48.98
TraesCS7A01G194500.1	Wheat	plasma membrane	50.0	48.63
PGSC0003DMT400043280	Potato	plasma membrane	49.35	48.5
PGSC0003DMT400008650	Potato	plasma membrane	48.04	47.63
TraesCS2A01G268200.1	Wheat	plasma membrane	49.35	47.0
VIT_07s0031g02340.t01	Wine grape	peroxisome	56.52	46.18
TraesCS2A01G331100.1	Wheat	cytosol, peroxisome, plasma membrane	46.3	45.81
TraesCS3A01G388000.2	Wheat	plasma membrane	44.35	44.16
TraesCS5A01G115800.2	Wheat	plasma membrane	44.13	43.84
TraesCS6A01G285300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	43.48	42.83
TraesCS6A01G285200.1	Wheat	golgi, peroxisome, plasma membrane	42.39	41.67
TraesCS3A01G388100.1	Wheat	plasma membrane	40.65	39.7
TraesCS2A01G499800.1	Wheat	plasma membrane	41.09	38.97
TraesCS2A01G348600.2	Wheat	cytosol, plasma membrane, vacuole	35.65	31.91

Protein Annotations

EnsemblPlants:TraesCS3A01G065600.1	EnsemblPlantsGene:TraesCS3A01G065600	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF295	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.1	:	:	:

Description

No Description!

Coordinates

chr3A:+:38613887..38615552

Molecular Weight (calculated)

50766.4 Da

IEP (calculated)

8.552

GRAVY (calculated)

0.525

Length

460 amino acids

Sequence
(BLAST)

001: MENPRTDPRD YDDDGGLKRT GTVWTATARI ITAVIGSGVL ALPWASAQLG WVIYPIMVLL FAGIICYTSA LLSDCYRSGD PSHGERNCTY MDTVKASLGR
101: AQVWLCQFSA YSNVFGVAIG HTIAAGMSML AIQRRASCFQ HNKGHRHPCN FPIWPYMITF GVAEIFFSQI PEYHTWWFSY LGPAMSFTYC SIGVGISIAK
201: VVENGVLKGG LVGIGMTAVT ASPMSKVWGS LEALGVIAFV YCYSRILIEI QDTIKAPPPP ESKVMKLATA MGVAVTTFLY LLFGFMGYAA LGGATPGNLL
301: AGLGFYEPYW VVDIANVAII VHLAVAYQVY CRPIYDFVER CAARRWPESS YVTREFDVLV LRSSYKLNLF RATWRTAFVV TTTVVAALLP FFHDVVALVG
401: ALGFWPLCVY IPVEMYVTQK KVLRWSPLWV WLQILSLGCL FVCLAAMAAS IVGIITIHKK

Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)

001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF

Arabidopsis Description

AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.