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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400030727 Potato plasma membrane 98.3 97.89
Solyc11g005070.1.1 Tomato plasma membrane 81.74 80.88
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 81.53 79.83
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 67.3 76.76
Bra015673.1-P Field mustard plasma membrane 77.07 76.26
CDX88364 Canola plasma membrane 77.07 76.26
CDX87522 Canola plasma membrane 76.65 75.84
CDX88365 Canola plasma membrane 76.65 75.84
AT1G77380.1 Thale cress plasma membrane 74.73 73.95
Zm00001d010231_P001 Maize plasma membrane 73.89 72.8
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 67.52 72.6
HORVU3Hr1G091110.1 Barley cytosol, vacuole 18.05 72.03
TraesCS3A01G406800.1 Wheat plasma membrane 71.13 71.73
GSMUA_Achr10P... Banana plasma membrane 63.48 71.7
KRH53283 Soybean golgi, peroxisome, plasma membrane 74.1 71.66
KRH64623 Soybean cytosol, peroxisome, plasma membrane 73.89 71.46
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 74.1 71.22
KRH17988 Soybean plasma membrane 72.4 71.19
HORVU3Hr1G091120.3 Barley plasma membrane 72.4 71.04
KRH16402 Soybean plasma membrane 72.19 70.98
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 73.04 70.93
CDY60629 Canola plasma membrane 62.42 70.84
TraesCS3B01G441100.1 Wheat plasma membrane 72.19 70.83
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 73.46 70.47
TraesCS3A01G407000.1 Wheat plasma membrane 71.76 70.42
TraesCS3B01G441200.1 Wheat plasma membrane 71.76 70.42
TraesCS3A01G406900.1 Wheat plasma membrane 71.76 70.42
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 74.1 70.36
Zm00001d053143_P002 Maize plasma membrane 70.49 70.34
GSMUA_Achr2P20670_001 Banana plasma membrane 65.82 70.29
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 66.67 70.25
Zm00001d042619_P002 Maize plasma membrane 73.67 70.24
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 70.91 70.17
Os01t0882800-01 Rice plasma membrane 72.61 70.08
EES03989 Sorghum plasma membrane 73.04 70.06
TraesCS3D01G402200.1 Wheat plasma membrane 71.55 69.92
Os12t0181500-01 Rice plasma membrane 70.06 69.47
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 72.82 69.43
Os12t0181600-01 Rice plasma membrane 69.85 69.26
CDY43854 Canola plasma membrane 71.55 69.2
Bra032199.1-P Field mustard plasma membrane 71.55 69.2
AT1G44100.1 Thale cress plasma membrane 70.28 68.96
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 70.7 68.66
CDY36017 Canola plasma membrane 70.06 68.61
TraesCS3D01G402300.1 Wheat plasma membrane 71.76 68.56
EES08162 Sorghum plasma membrane 69.85 68.4
EES16761 Sorghum plasma membrane 69.21 68.2
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 72.19 68.14
Zm00001d023603_P001 Maize plasma membrane 53.5 68.11
EES16764 Sorghum plasma membrane 69.64 68.05
EES15765 Sorghum plasma membrane 69.0 67.85
Bra014020.1-P Field mustard plasma membrane 69.21 67.78
TraesCS4D01G097400.1 Wheat plasma membrane 70.06 67.76
TraesCS4B01G100800.1 Wheat plasma membrane 70.06 67.76
HORVU4Hr1G043680.3 Barley plasma membrane 70.06 67.62
Zm00001d023593_P001 Maize plasma membrane 68.37 67.51
TraesCS4A01G215300.1 Wheat plasma membrane 69.64 67.49
EES16763 Sorghum plasma membrane 68.79 67.36
CDY14972 Canola plasma membrane 67.94 67.23
Bra036939.1-P Field mustard plasma membrane 67.94 67.23
TraesCS5D01G125700.1 Wheat plasma membrane 68.37 67.22
TraesCS5A01G115100.1 Wheat plasma membrane 68.37 67.22
HORVU5Hr1G037660.1 Barley plasma membrane 68.37 67.22
Zm00001d023592_P001 Maize plasma membrane 68.37 67.08
TraesCS5B01G116100.1 Wheat plasma membrane 68.15 67.01
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 68.15 66.6
CDY47793 Canola plasma membrane 67.3 66.6
GSMUA_Achr8P32600_001 Banana plasma membrane 76.22 65.63
HORVU3Hr1G091070.1 Barley cytosol 62.42 64.19
HORVU3Hr1G091020.2 Barley mitochondrion 72.19 64.03
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 71.97 63.84
KXG23123 Sorghum mitochondrion, plastid 67.94 63.74
Zm00001d004705_P001 Maize plasma membrane 60.72 63.0
CDY71454 Canola golgi, peroxisome, plasma membrane 37.37 62.86
TraesCS1B01G275200.1 Wheat mitochondrion 74.1 62.32
EES08159 Sorghum cytosol, peroxisome, plasma membrane 64.12 62.14
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 60.72 62.04
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 67.3 61.79
TraesCS5B01G120000.1 Wheat plasma membrane 61.78 61.78
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 62.0 61.6
Solyc04g077050.2.1 Tomato plasma membrane 62.42 61.12
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 61.36 59.96
Solyc01g106800.2.1 Tomato plasma membrane 58.81 59.57
Zm00001d050211_P001 Maize peroxisome 56.05 58.15
HORVU2Hr1G084780.1 Barley extracellular 28.24 58.08
Solyc12g088190.1.1 Tomato plasma membrane 59.02 56.97
TraesCS2B01G367000.1 Wheat plasma membrane 59.24 56.36
EES13588 Sorghum cytosol, peroxisome, plasma membrane 59.45 56.22
TraesCS3A01G065600.1 Wheat plasma membrane 54.56 55.87
TraesCS7D01G388300.1 Wheat plasma membrane 60.72 54.27
Solyc07g066010.2.1 Tomato plasma membrane 51.59 53.29
TraesCS2D01G346500.1 Wheat plasma membrane 54.99 51.59
HORVU2Hr1G084710.1 Barley plasma membrane 40.13 50.67
Solyc07g066020.2.1 Tomato plasma membrane 50.53 50.64
Os12t0195100-00 Rice plastid 43.95 41.73
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 41.19 37.45
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 40.34 36.97
Protein Annotations
MapMan:24.2.3.4.1InterPro:AA_transpt_TMGO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020
GO:GO:0016021UniProt:K4C6J2PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF456EnsemblPlantsGene:Solyc06g060110.2
EnsemblPlants:Solyc06g060110.2.1TMHMM:TMhelixUniParc:UPI0002765F68SEG:seg::
Description
No Description!
Coordinates
chr6:-:38031206..38033821
Molecular Weight (calculated)
51699.2 Da
IEP (calculated)
8.067
GRAVY (calculated)
0.520
Length
471 amino acids
Sequence
(BLAST)
001: MADKPHQVFE VYGESKCFDD DGRIKRTGSV WTASAHIITA VIGSGVLSLA WATAQLGWVA GPTVLLLFSF VTYYTSALLS DCYRTGDPVT GKRNYTYMDA
101: VRANLGGFQV KICGVIQYAN LFGVAIGYTI ASSISMVAVN RSNCFHKQGH HAACNVSSTP YMIMFGVMEI IFSQIPDFDQ ISWLSIVAAV MSFTYSTIGL
201: GLGVAQVAET GKIEGSLTGI SIGTEVTEMQ KIWRSFQALG AIAFAYSYSL ILIEIQDTLK SPPAEAKTMK RATLISVAVT TVFYMLCGCF GYAAFGDQSP
301: GNLLTGFGFY NPYWLLDIAN IAIVVHLVGA YQVYCQPLFA FVEKTAAEWY PDSKIITKEI DVPIPGFKPF KLNLFRLVWR TIFVIITTVI SMLMPFFNDV
401: VGILGAFGFW PLTVYFPVEM YIVQKRITKW SARWICLQIL SGACLVISIA AAAGSFAGVV SDLKVYRPFQ S
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.