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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, vacuole

Predictor Summary:
  • cytosol 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, vacuole
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71454 Canola golgi, peroxisome, plasma membrane 65.25 27.5
HORVU3Hr1G091070.1 Barley cytosol 100.0 25.76
TraesCS3A01G406800.1 Wheat plasma membrane 98.31 24.84
HORVU3Hr1G091120.3 Barley plasma membrane 100.0 24.58
TraesCS3B01G441100.1 Wheat plasma membrane 99.15 24.38
TraesCS3D01G402200.1 Wheat plasma membrane 99.15 24.27
TraesCS3A01G406900.1 Wheat plasma membrane 98.31 24.17
TraesCS3A01G407000.1 Wheat plasma membrane 98.31 24.17
TraesCS3B01G441200.1 Wheat plasma membrane 98.31 24.17
TraesCS3D01G402300.1 Wheat plasma membrane 98.31 23.53
HORVU3Hr1G091020.2 Barley mitochondrion 100.0 22.22
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 99.15 22.03
EES03989 Sorghum plasma membrane 89.83 21.59
Zm00001d042619_P002 Maize plasma membrane 88.98 21.26
TraesCS7D01G388300.1 Wheat plasma membrane 94.92 21.25
Os01t0882800-01 Rice plasma membrane 87.29 21.11
GSMUA_Achr10P... Banana plasma membrane 72.03 20.38
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 84.75 20.24
HORVU2Hr1G084780.1 Barley extracellular 38.14 19.65
GSMUA_Achr2P20670_001 Banana plasma membrane 70.34 18.82
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 71.19 18.79
HORVU5Hr1G037660.1 Barley plasma membrane 75.42 18.58
CDY60629 Canola plasma membrane 65.25 18.55
PGSC0003DMT400030727 Potato plasma membrane 73.73 18.39
PGSC0003DMT400043280 Potato plasma membrane 72.88 18.38
Solyc06g060110.2.1 Tomato plasma membrane 72.03 18.05
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 72.03 17.53
AT1G77380.1 Thale cress plasma membrane 70.34 17.44
CDX88364 Canola plasma membrane 69.49 17.23
CDX87522 Canola plasma membrane 69.49 17.23
CDX88365 Canola plasma membrane 69.49 17.23
Bra015673.1-P Field mustard plasma membrane 69.49 17.23
VIT_10s0116g01380.t01 Wine grape plasma membrane 66.1 17.22
HORVU4Hr1G043680.3 Barley plasma membrane 71.19 17.21
PGSC0003DMT400015426 Potato plasma membrane 68.64 16.91
PGSC0003DMT400008650 Potato plasma membrane 66.1 16.81
Solyc11g005070.1.1 Tomato plasma membrane 67.8 16.81
CDY21569 Canola plasma membrane 67.8 16.49
Bra009371.1-P Field mustard plasma membrane 67.8 16.49
CDX69918 Canola plasma membrane 67.8 16.49
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 66.1 16.22
AT5G63850.1 Thale cress plasma membrane 63.56 16.09
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 66.95 16.02
CDX81121 Canola plasma membrane 66.1 16.02
CDX78353 Canola plasma membrane 66.1 16.02
Bra006016.1-P Field mustard plasma membrane 66.1 16.02
CDY39844 Canola plasma membrane 62.71 15.88
CDY43761 Canola plasma membrane 62.71 15.88
Bra029199.1-P Field mustard plasma membrane 62.71 15.88
CDY31348 Canola plasma membrane 62.71 15.88
KRH16402 Soybean plasma membrane 64.41 15.87
Bra032199.1-P Field mustard plasma membrane 65.25 15.81
CDY43854 Canola plasma membrane 65.25 15.81
CDY36017 Canola plasma membrane 64.41 15.8
Bra014020.1-P Field mustard plasma membrane 64.41 15.8
Bra024241.1-P Field mustard plasma membrane 61.86 15.67
KRH17988 Soybean plasma membrane 63.56 15.66
KRH53283 Soybean golgi, peroxisome, plasma membrane 64.41 15.61
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 64.41 15.51
CDX84450 Canola plasma membrane 61.02 15.45
AT1G44100.1 Thale cress plasma membrane 62.71 15.42
CDY14972 Canola plasma membrane 61.86 15.34
Bra036939.1-P Field mustard plasma membrane 61.86 15.34
HORVU2Hr1G084710.1 Barley plasma membrane 48.31 15.28
KRH64623 Soybean cytosol, peroxisome, plasma membrane 62.71 15.2
CDY47793 Canola plasma membrane 61.02 15.13
VIT_07s0031g02340.t01 Wine grape peroxisome 72.03 15.1
HORVU2Hr1G061190.4 Barley plasma membrane 56.78 13.81
HORVU7Hr1G088510.2 Barley plasma membrane 53.39 13.73
HORVU7Hr1G038330.1 Barley plasma membrane 56.78 13.62
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 55.93 12.77
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 49.15 12.47
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 46.61 11.78
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 46.61 11.78
HORVU2Hr1G111140.3 Barley golgi 46.61 11.09
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 48.31 10.86
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 42.37 9.49
Protein Annotations
EnsemblPlants:HORVU3Hr1G091110.1EnsemblPlantsGene:HORVU3Hr1G091110GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:AA_transpt_TM
PANTHER:PTHR22950PANTHER:PTHR22950:SF295PFAM:PF01490TMHMM:TMhelixUniParc:UPI000B462786UniProt:A0A287M939
MapMan:35.1:::::
Description
No Description!
Coordinates
chrchr3H:+:634564743..634565098
Molecular Weight (calculated)
12737.3 Da
IEP (calculated)
7.928
GRAVY (calculated)
0.319
Length
118 amino acids
Sequence
(BLAST)
001: ADCYRSGDQS TGKRNYTYMD AVNANLSGIK VQICGVLQYA NIVGVAIGYT IAASISMLAI KRANCFHGNG HADPCKVSSV PYMIIFGVAQ VFFSQIPDFD
101: QISWLSMLAA AMSFTYSS
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.