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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 Bra012567.1-P AT4G19030.1 21798944
AT5G63850.1 Bra013361.1-P AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39844 Canola plasma membrane 99.36 99.36
CDY31348 Canola plasma membrane 99.36 99.36
AT5G63850.1 Thale cress plasma membrane 94.85 94.85
Bra024241.1-P Field mustard plasma membrane 94.21 94.21
Bra006016.1-P Field mustard plasma membrane 87.55 83.78
Bra009371.1-P Field mustard plasma membrane 85.62 82.27
GSMUA_Achr10P... Banana plasma membrane 64.81 72.42
GSMUA_Achr2P20670_001 Banana plasma membrane 67.6 71.43
VIT_10s0116g01380.t01 Wine grape plasma membrane 68.88 70.86
Bra015673.1-P Field mustard plasma membrane 72.32 70.8
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 67.81 70.69
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 62.23 70.22
TraesCS3A01G406800.1 Wheat plasma membrane 69.53 69.38
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 71.46 68.66
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 63.52 67.58
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 70.17 67.42
Zm00001d010231_P001 Maize plasma membrane 69.1 67.36
TraesCS3A01G406900.1 Wheat plasma membrane 69.31 67.29
TraesCS3B01G441200.1 Wheat plasma membrane 69.1 67.08
HORVU3Hr1G091120.3 Barley plasma membrane 69.1 67.08
TraesCS3B01G441100.1 Wheat plasma membrane 69.1 67.08
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 68.45 67.02
TraesCS3D01G402200.1 Wheat plasma membrane 69.31 67.01
TraesCS3A01G407000.1 Wheat plasma membrane 68.88 66.88
EES03989 Sorghum plasma membrane 70.17 66.6
Os01t0882800-01 Rice plasma membrane 69.53 66.39
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 69.53 66.12
Zm00001d053143_P002 Maize plasma membrane 66.95 66.1
TraesCS5B01G116100.1 Wheat plasma membrane 67.81 65.97
Zm00001d023593_P001 Maize plasma membrane 67.38 65.83
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 69.74 65.79
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 69.31 65.78
TraesCS5A01G115100.1 Wheat plasma membrane 67.6 65.76
TraesCS5D01G125700.1 Wheat plasma membrane 67.6 65.76
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 70.39 65.73
HORVU5Hr1G037660.1 Barley plasma membrane 67.38 65.55
Os12t0181500-01 Rice plasma membrane 66.74 65.47
Zm00001d042619_P002 Maize plasma membrane 69.31 65.38
Os12t0181600-01 Rice plasma membrane 66.52 65.26
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 67.38 65.15
EES15765 Sorghum plasma membrane 66.95 65.14
TraesCS3D01G402300.1 Wheat plasma membrane 68.88 65.11
TraesCS4B01G100800.1 Wheat plasma membrane 68.03 65.09
Zm00001d023592_P001 Maize plasma membrane 66.95 65.0
EES16764 Sorghum plasma membrane 67.17 64.94
TraesCS4D01G097400.1 Wheat plasma membrane 67.81 64.89
EES08162 Sorghum plasma membrane 66.74 64.66
TraesCS4A01G215300.1 Wheat plasma membrane 67.38 64.61
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 68.67 64.52
EES16763 Sorghum plasma membrane 66.52 64.45
HORVU4Hr1G043680.3 Barley plasma membrane 67.38 64.34
EES16761 Sorghum plasma membrane 65.88 64.23
Zm00001d023603_P001 Maize plasma membrane 50.86 64.05
VIT_07s0031g02340.t01 Wine grape peroxisome 75.97 62.88
HORVU3Hr1G091110.1 Barley cytosol, vacuole 15.88 62.71
Bra032199.1-P Field mustard plasma membrane 65.24 62.42
Bra014020.1-P Field mustard plasma membrane 64.16 62.16
Zm00001d004705_P001 Maize plasma membrane 60.09 61.67
HORVU3Hr1G091070.1 Barley cytosol 60.3 61.35
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 69.74 61.21
Bra036939.1-P Field mustard plasma membrane 62.45 61.13
KXG23123 Sorghum mitochondrion, plastid 65.67 60.96
EES08159 Sorghum cytosol, peroxisome, plasma membrane 63.52 60.91
HORVU3Hr1G091020.2 Barley mitochondrion 69.31 60.83
TraesCS5B01G120000.1 Wheat plasma membrane 61.37 60.72
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 61.37 60.34
GSMUA_Achr8P32600_001 Banana plasma membrane 70.39 59.96
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 59.01 59.65
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 65.45 59.45
TraesCS1B01G275200.1 Wheat mitochondrion 69.53 57.86
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 59.23 57.26
Bra039735.1-P Field mustard plasma membrane 56.44 55.96
Zm00001d050211_P001 Maize peroxisome 54.08 55.51
HORVU2Hr1G084780.1 Barley extracellular 27.04 55.02
EES13588 Sorghum cytosol, peroxisome, plasma membrane 57.51 53.82
Bra027868.1-P Field mustard cytosol, peroxisome, plasma membrane 55.15 53.65
TraesCS2B01G367000.1 Wheat plasma membrane 56.65 53.33
Bra031695.1-P Field mustard plasma membrane 52.79 52.9
TraesCS3A01G065600.1 Wheat plasma membrane 51.93 52.61
Bra019967.1-P Field mustard plasma membrane 43.13 52.48
Bra031696.1-P Field mustard plasma membrane 31.55 51.76
Bra035446.1-P Field mustard cytosol, peroxisome, plasma membrane 56.22 51.68
TraesCS7D01G388300.1 Wheat plasma membrane 58.37 51.61
Bra019969.1-P Field mustard plasma membrane 47.42 50.23
HORVU2Hr1G084710.1 Barley plasma membrane 39.91 49.87
Bra031697.1-P Field mustard plasma membrane 51.29 49.79
TraesCS2D01G346500.1 Wheat plasma membrane 52.79 49.0
Bra017905.1-P Field mustard peroxisome 56.01 48.16
Bra026481.1-P Field mustard plasma membrane 46.14 46.04
Os12t0195100-00 Rice plastid 43.35 40.73
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 40.56 36.49
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 39.91 36.19
Bra019968.1-P Field mustard endoplasmic reticulum, peroxisome, plasma membrane 39.27 35.06
Protein Annotations
EnsemblPlants:Bra029199.1EnsemblPlants:Bra029199.1-PEnsemblPlantsGene:Bra029199GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF474PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002545F90UniProt:M4EK82MapMan:24.2.3.4.1:::
Description
AT5G63850 (E=1e-254) AAP4 | AAP4; acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter/ primary active transmembrane transporter
Coordinates
chrA02:+:26586015..26587974
Molecular Weight (calculated)
51185.1 Da
IEP (calculated)
9.238
GRAVY (calculated)
0.535
Length
466 amino acids
Sequence
(BLAST)
001: MDVSRPAFKC FDDDGRLKRS GTVWTASAHI ITAVIGSGVL SLAWAIGQLG WIAGPAVMFL FSFVTYFSST LLSDCYRTGD PVSGKRNYTY MDAVQSILGG
101: FRFKICGLIQ FLNLFGITVG YTIAASISMM AIKRSNCFHE SGGKNPCHMS SNPYMIMFGV TEILLSQIKD FDQIWWLSIV AAIMSFTYSA IGLALGIIQV
201: AANGVLKGSL TGISIGTVTQ TQKIWRTFQA LGDIAFAYSY SVVLIEIQDT VRSPPAESKT MKQATRISIA VTTTFYMLCG CMGYAAFGDA APGNLLTGFG
301: FYNPFWLLDV ANVAIVIHLV GAYQVFAQPI FAFVDKQAAA RFPDSDLVSK EFEIRIPGVR SPYKVNVFRA VFRSCFVVLT TVISMLMPFF NDVVGILGAL
401: GFWPLTVYFP VEMYIKQRKV ERWSMKWVCL KMLSGGCLVI TVVAGVGSVA GVMLDLKVYK PFKTTY
Best Arabidopsis Sequence Match ( AT5G63850.1 )
(BLAST)
001: MDVPRPAFKC FDDDGRLKRS GTVWTASAHI ITAVIGSGVL SLAWAIGQLG WIAGPTVMLL FSFVTYYSST LLSDCYRTGD PVSGKRNYTY MDAVRSILGG
101: FRFKICGLIQ YLNLFGITVG YTIAASISMM AIKRSNCFHE SGGKNPCHMS SNPYMIMFGV TEILLSQIKD FDQIWWLSIV AAIMSFTYSA IGLALGIIQV
201: AANGVVKGSL TGISIGAVTQ TQKIWRTFQA LGDIAFAYSY SVVLIEIQDT VRSPPAESKT MKIATRISIA VTTTFYMLCG CMGYAAFGDK APGNLLTGFG
301: FYNPFWLLDV ANAAIVIHLV GAYQVFAQPI FAFIEKQAAA RFPDSDLVTK EYEIRIPGFR SPYKVNVFRA VYRSGFVVLT TVISMLMPFF NDVVGILGAL
401: GFWPLTVYFP VEMYIRQRKV ERWSMKWVCL QMLSCGCLMI TLVAGVGSIA GVMLDLKVYK PFKTTY
Arabidopsis Description
AAP4AAP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UDW1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.