Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G091110.1 Barley cytosol, vacuole 25.76 100.0
TraesCS3A01G406800.1 Wheat plasma membrane 86.46 84.8
HORVU3Hr1G091120.3 Barley plasma membrane 87.77 83.75
TraesCS3A01G406900.1 Wheat plasma membrane 86.9 82.92
TraesCS3D01G402200.1 Wheat plasma membrane 86.9 82.57
TraesCS3B01G441200.1 Wheat plasma membrane 85.81 81.88
TraesCS3B01G441100.1 Wheat plasma membrane 85.81 81.88
TraesCS3A01G407000.1 Wheat plasma membrane 85.59 81.67
TraesCS3D01G402300.1 Wheat plasma membrane 86.46 80.32
HORVU3Hr1G091020.2 Barley mitochondrion 87.99 75.89
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 86.24 74.39
EES03989 Sorghum plasma membrane 79.48 74.13
Os01t0882800-01 Rice plasma membrane 77.73 72.95
Zm00001d042619_P002 Maize plasma membrane 78.6 72.87
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 74.45 69.03
CDY60629 Canola plasma membrane 58.52 64.58
VIT_10s0116g01380.t01 Wine grape plasma membrane 62.88 63.58
Solyc06g060110.2.1 Tomato plasma membrane 64.19 62.42
PGSC0003DMT400030727 Potato plasma membrane 64.41 62.37
HORVU4Hr1G043680.3 Barley plasma membrane 65.72 61.68
GSMUA_Achr10P... Banana plasma membrane 56.11 61.63
HORVU5Hr1G037660.1 Barley plasma membrane 64.41 61.59
HORVU2Hr1G084780.1 Barley extracellular 30.79 61.57
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 65.07 61.44
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 59.83 61.3
AT5G63850.1 Thale cress plasma membrane 62.01 60.94
TraesCS7D01G388300.1 Wheat plasma membrane 70.09 60.91
CDY39844 Canola plasma membrane 61.57 60.52
CDY31348 Canola plasma membrane 61.57 60.52
Bra029199.1-P Field mustard plasma membrane 61.35 60.3
AT1G77380.1 Thale cress plasma membrane 62.66 60.29
Bra015673.1-P Field mustard plasma membrane 62.66 60.29
GSMUA_Achr2P20670_001 Banana plasma membrane 57.86 60.09
CDX87522 Canola plasma membrane 62.45 60.08
CDX88364 Canola plasma membrane 62.45 60.08
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 62.66 59.67
CDX88365 Canola plasma membrane 62.01 59.66
CDY43761 Canola plasma membrane 60.7 59.66
PGSC0003DMT400015426 Potato plasma membrane 62.23 59.5
Bra024241.1-P Field mustard plasma membrane 60.48 59.44
CDX84450 Canola plasma membrane 60.26 59.23
PGSC0003DMT400043280 Potato plasma membrane 60.26 58.97
Bra009371.1-P Field mustard plasma membrane 62.23 58.76
CDY21569 Canola plasma membrane 62.23 58.76
CDX69918 Canola plasma membrane 62.23 58.76
Solyc11g005070.1.1 Tomato plasma membrane 60.92 58.61
CDX78353 Canola plasma membrane 62.23 58.52
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 62.88 58.42
Bra006016.1-P Field mustard plasma membrane 62.01 58.32
CDX81121 Canola plasma membrane 62.01 58.32
KRH53283 Soybean golgi, peroxisome, plasma membrane 60.48 56.88
KRH17988 Soybean plasma membrane 59.39 56.78
KRH64623 Soybean cytosol, peroxisome, plasma membrane 60.26 56.67
KRH16402 Soybean plasma membrane 58.95 56.37
CDY36017 Canola plasma membrane 58.95 56.13
AT1G44100.1 Thale cress plasma membrane 58.73 56.04
Bra014020.1-P Field mustard plasma membrane 58.73 55.93
Bra032199.1-P Field mustard plasma membrane 59.17 55.65
CDY43854 Canola plasma membrane 59.17 55.65
CDY47793 Canola plasma membrane 56.33 54.2
Bra036939.1-P Field mustard plasma membrane 56.11 53.99
CDY14972 Canola plasma membrane 56.11 53.99
PGSC0003DMT400008650 Potato plasma membrane 54.59 53.88
VIT_07s0031g02340.t01 Wine grape peroxisome 65.5 53.29
HORVU2Hr1G084710.1 Barley plasma membrane 43.01 52.81
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 54.37 50.82
HORVU7Hr1G038330.1 Barley plasma membrane 52.4 48.78
HORVU2Hr1G061190.4 Barley plasma membrane 50.87 48.04
HORVU7Hr1G088510.2 Barley plasma membrane 47.16 47.06
CDY71454 Canola golgi, peroxisome, plasma membrane 28.6 46.79
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 52.18 46.23
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 45.63 44.95
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 42.79 41.97
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 41.92 41.11
HORVU2Hr1G111140.3 Barley golgi 41.27 38.1
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 42.58 37.14
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 34.06 29.6
Protein Annotations
EnsemblPlants:HORVU3Hr1G091070.1EnsemblPlantsGene:HORVU3Hr1G091070InterPro:AA_transpt_TMncoils:CoilPANTHER:PTHR22950PANTHER:PTHR22950:SF295
PFAM:PF01490SEG:segTMHMM:TMhelixMapMan:24.2.3.4.1::
Description
No Description!
Coordinates
chrchr3H:+:634458403..634459998
Molecular Weight (calculated)
45884.2 Da
IEP (calculated)
9.099
GRAVY (calculated)
0.402
Length
458 amino acids
Sequence
(BLAST)
001: DPGAASRPKQ VXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXLRRPE HRQAXXXXLV TYFTSSLLAD CYRSGDQSTG KRNYTYMDAV NANLSGIKVQ
101: ICGVLQYANI VGVAIGYTIA ASISMLAIKR ANCFHGNGHA DPCKVSSVPY MIIFGVAQVF FSQIPDFDQI SWLSMLAAAM SFTYSSIGLG LGIVQVIANG
201: GMKGSLTGIS IGTVTPMQKV WRSLQAFGDI AFAYSYSLIL IEIQDTIRAP PPSESTVMKR ATMVSVAVTT VFYMLCGCMG YAAFGDAAPG NLLTGFGFYE
301: PFWLLDVANA AIVVHLVGAY QVYCQPLFAF VEKWAAKRWP ESTFVTGEVE VPLFRTYKVN MFRATWRTAF VVATTVVSMM LPFFNDVVGF LGALGFWPLT
401: VYFPVEMYVV QKKVPKWSTR WVCLQMLSVG CLAISLAAAA GSIAGIKSDL KVYHPFKT
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.