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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G356600.1 Wheat golgi, peroxisome, plasma membrane 98.16 97.76
TraesCS7D01G366200.1 Wheat peroxisome 97.55 97.55
TraesCS7B01G271200.1 Wheat peroxisome 97.14 97.14
Os06t0556000-01 Rice plasma membrane 84.29 84.8
EER88513 Sorghum peroxisome 81.63 81.47
Zm00001d046263_P001 Maize peroxisome 80.41 81.07
HORVU7Hr1G088510.2 Barley plasma membrane 67.14 71.68
HORVU7Hr1G038330.1 Barley plasma membrane 70.61 70.33
GSMUA_Achr10P... Banana plasma membrane 62.86 67.69
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 69.8 66.15
HORVU3Hr1G091110.1 Barley cytosol, vacuole 15.51 64.41
HORVU5Hr1G037660.1 Barley plasma membrane 60.2 61.59
HORVU4Hr1G043680.3 Barley plasma membrane 60.0 60.25
HORVU3Hr1G091120.3 Barley plasma membrane 58.37 59.58
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 58.16 57.69
KRH04869 Soybean peroxisome, plasma membrane, vacuole 54.08 56.5
HORVU2Hr1G061190.4 Barley plasma membrane 54.9 55.46
HORVU3Hr1G091070.1 Barley cytosol 50.82 54.37
HORVU3Hr1G091020.2 Barley mitochondrion 58.57 54.05
VIT_04s0008g00240.t01 Wine grape plasma membrane 52.45 53.99
VIT_04s0008g00280.t01 Wine grape plasma membrane 52.24 53.44
VIT_04s0008g00230.t01 Wine grape plasma membrane 51.63 53.26
KRH16264 Soybean plasma membrane 50.2 52.12
KRH52796 Soybean plasma membrane 49.18 51.28
KRH62110 Soybean plasma membrane 49.18 51.17
HORVU2Hr1G084780.1 Barley extracellular 23.88 51.09
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 48.37 50.75
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 47.96 50.54
KRH52799 Soybean plasma membrane 48.57 50.53
KRH16269 Soybean plasma membrane 45.1 48.04
HORVU2Hr1G084710.1 Barley plasma membrane 35.31 46.38
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 41.63 43.68
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 45.92 42.86
HORVU2Hr1G111140.3 Barley golgi 43.06 42.54
VIT_04s0008g00250.t01 Wine grape plasma membrane 51.02 42.37
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 36.73 34.16
Protein Annotations
EMBL:AK360230EnsemblPlants:HORVU7Hr1G088560.2EnsemblPlantsGene:HORVU7Hr1G088560GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF336PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI0002005911UniProt:F2D8L8MapMan:24.2.3.4.1:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D8L8]
Coordinates
chrchr7H:-:537880183..537888693
Molecular Weight (calculated)
53247.4 Da
IEP (calculated)
8.275
GRAVY (calculated)
0.403
Length
490 amino acids
Sequence
(BLAST)
001: MTKDVEMAAR NGSKGAAAGE AYYPSPPGQG GDVDVDDDGK QRRTGTVWTA SAHIITAVIG SGVLSLAWAT AQLGWVVGPV TLMLFAAITY YTSGLLADCY
101: RTGDPLTGKR NYTYMDAVAS YLSRWQVWAC GVFQYVNLVG TAIGYTITAS ISAAAINKAN CFHKNGRAAD CGVYDSMYMV VFGVVQIFFS QVPNFHDLWW
201: LSILAAVMSF TYASIAVGLS LAQTISGPTG KSTLTGTEVG VDVDSAQKIW LAFQALGDIA FAYSYSMILI EIQDTVRSPP AENKTMKKAT LVGVSTTTAF
301: YMLCGCLGYA AFGNGAKGNI LTGFGFYEPY WLIDFANVCI VVHLVGAYQV FCQPIFAAVE NFAAATWPNA GFITREHRVA AGKRLGFNLN LFRLTWRTAF
401: VMVSTLLAIL MPFFNDILGF LGAIGFWPLT VYFPVEMYIR QRGIQRYTTR WVALQTLSFL CFLVSLAAAV ASIEGVTESL KNYVPFKTKS
Best Arabidopsis Sequence Match ( AT1G58360.1 )
(BLAST)
001: MKSFNTEGHN HSTAESGDAY TVSDPTKNVD EDGREKRTGT WLTASAHIIT AVIGSGVLSL AWAIAQLGWI AGTSILLIFS FITYFTSTML ADCYRAPDPV
101: TGKRNYTYMD VVRSYLGGRK VQLCGVAQYG NLIGVTVGYT ITASISLVAV GKSNCFHDKG HTADCTISNY PYMAVFGIIQ VILSQIPNFH KLSFLSIMAA
201: VMSFTYATIG IGLAIATVAG GKVGKTSMTG TAVGVDVTAA QKIWRSFQAV GDIAFAYAYA TVLIEIQDTL RSSPAENKAM KRASLVGVST TTFFYILCGC
301: IGYAAFGNNA PGDFLTDFGF FEPFWLIDFA NACIAVHLIG AYQVFAQPIF QFVEKKCNRN YPDNKFITSE YSVNVPFLGK FNISLFRLVW RTAYVVITTV
401: VAMIFPFFNA ILGLIGAASF WPLTVYFPVE MHIAQTKIKK YSARWIALKT MCYVCLIVSL LAAAGSIAGL ISSVKTYKPF RTMHE
Arabidopsis Description
AAP1NAT2 [Source:UniProtKB/TrEMBL;Acc:A0A178WEG7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.