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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:mitochondrion
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63850.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G091110.1 Barley cytosol, vacuole 22.22 100.0
HORVU3Hr1G091120.3 Barley plasma membrane 90.02 99.58
TraesCS3A01G406900.1 Wheat plasma membrane 89.27 98.75
TraesCS3D01G402200.1 Wheat plasma membrane 89.27 98.34
TraesCS3A01G406800.1 Wheat plasma membrane 86.25 98.07
TraesCS3B01G441100.1 Wheat plasma membrane 88.51 97.92
TraesCS3B01G441200.1 Wheat plasma membrane 88.32 97.71
TraesCS3A01G407000.1 Wheat plasma membrane 88.14 97.5
TraesCS3D01G402300.1 Wheat plasma membrane 88.89 95.74
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 92.66 92.66
HORVU3Hr1G091070.1 Barley cytosol 75.89 87.99
EES03989 Sorghum plasma membrane 80.41 86.97
Zm00001d042619_P002 Maize plasma membrane 79.47 85.43
Os01t0882800-01 Rice plasma membrane 77.97 84.84
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 75.33 80.97
TraesCS7D01G388300.1 Wheat plasma membrane 73.45 74.0
GSMUA_Achr10P... Banana plasma membrane 57.25 72.9
Solyc06g060110.2.1 Tomato plasma membrane 64.03 72.19
PGSC0003DMT400030727 Potato plasma membrane 64.22 72.09
HORVU5Hr1G037660.1 Barley plasma membrane 64.78 71.82
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 60.45 71.81
HORVU4Hr1G043680.3 Barley plasma membrane 65.72 71.52
GSMUA_Achr2P20670_001 Banana plasma membrane 59.32 71.43
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 64.97 71.13
AT1G77380.1 Thale cress plasma membrane 62.71 69.96
AT5G63850.1 Thale cress plasma membrane 61.39 69.96
Bra015673.1-P Field mustard plasma membrane 62.52 69.75
CDX87522 Canola plasma membrane 62.34 69.54
CDY39844 Canola plasma membrane 61.02 69.53
CDY31348 Canola plasma membrane 61.02 69.53
CDX88364 Canola plasma membrane 62.15 69.33
Bra029199.1-P Field mustard plasma membrane 60.83 69.31
VIT_10s0116g01380.t01 Wine grape plasma membrane 58.95 69.09
CDX88365 Canola plasma membrane 61.77 68.91
PGSC0003DMT400015426 Potato plasma membrane 61.96 68.68
CDY43761 Canola plasma membrane 60.26 68.67
Bra024241.1-P Field mustard plasma membrane 60.08 68.45
CDY21569 Canola plasma membrane 62.52 68.45
CDX69918 Canola plasma membrane 62.52 68.45
Bra009371.1-P Field mustard plasma membrane 62.34 68.25
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 61.77 68.19
CDX84450 Canola plasma membrane 59.7 68.03
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 63.09 67.95
CDX78353 Canola plasma membrane 62.15 67.76
Solyc11g005070.1.1 Tomato plasma membrane 60.64 67.65
CDX81121 Canola plasma membrane 61.96 67.56
Bra006016.1-P Field mustard plasma membrane 61.96 67.56
KRH17988 Soybean plasma membrane 60.26 66.81
PGSC0003DMT400043280 Potato plasma membrane 58.76 66.67
KRH16402 Soybean plasma membrane 59.7 66.18
KRH53283 Soybean golgi, peroxisome, plasma membrane 60.45 65.91
KRH64623 Soybean cytosol, peroxisome, plasma membrane 60.26 65.71
CDY60629 Canola plasma membrane 51.22 65.54
CDY36017 Canola plasma membrane 58.38 64.45
CDY43854 Canola plasma membrane 58.95 64.27
Bra032199.1-P Field mustard plasma membrane 58.95 64.27
Bra014020.1-P Field mustard plasma membrane 58.19 64.24
AT1G44100.1 Thale cress plasma membrane 58.0 64.17
CDY47793 Canola plasma membrane 56.69 63.24
Bra036939.1-P Field mustard plasma membrane 56.5 63.03
CDY14972 Canola plasma membrane 56.5 63.03
PGSC0003DMT400008650 Potato plasma membrane 54.8 62.72
HORVU2Hr1G084780.1 Barley extracellular 26.55 61.57
CDY71454 Canola golgi, peroxisome, plasma membrane 32.39 61.43
VIT_07s0031g02340.t01 Wine grape peroxisome 64.78 61.1
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 54.05 58.57
HORVU7Hr1G038330.1 Barley plasma membrane 52.17 56.3
HORVU2Hr1G061190.4 Barley plasma membrane 51.22 56.08
HORVU7Hr1G088510.2 Barley plasma membrane 47.27 54.68
HORVU2Hr1G084710.1 Barley plasma membrane 37.66 53.62
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 52.17 53.58
HORVU2Hr1G081790.1 Barley cytosol, peroxisome, plasma membrane 45.76 52.26
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 42.56 48.39
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 42.56 48.39
HORVU2Hr1G111140.3 Barley golgi 41.43 44.35
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 42.56 43.05
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 35.59 35.86
Protein Annotations
EMBL:AK364124EnsemblPlants:HORVU3Hr1G091020.2EnsemblPlantsGene:HORVU3Hr1G091020GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF295PFAM:PF01490SEG:segTMHMM:TMhelix
UniParc:UPI000B476D36UniProt:A0A287M927MapMan:24.2.3.4.1:::
Description
No Description!
Coordinates
chrchr3H:-:634362451..634365212
Molecular Weight (calculated)
57481.4 Da
IEP (calculated)
9.024
GRAVY (calculated)
0.431
Length
531 amino acids
Sequence
(BLAST)
001: TTTAAASQQR AISPRRSLST GRACLRCCAL LGRVEELPAE KAIKLRERSI GMADKVVATY YYPPMEVAAA ELGQTAGSKL DDDGRNKRTG TMWTASSHII
101: TAVIGSGVLS LGWAIAQLGW VAGPAVMLLF SLVTYFTSSL LADCYRSGDQ STGKRNYTYM DAVNANLSGI KVQICGVLQY ANIVGVAIGY TIAASISMLA
201: IKRANCFHGN GHADPCKVSS VPYMIIFGVA QVFFSQIPDF DQISWLSMLA AAMSFTYSSI GLGLGIVQVI ANGGMKGSLT GISIGTVTPM QKVWRSLQAF
301: GDIAFAYSYS LILIEIQDTI RAPPPSESTV MKRATMVSVA VTTVFYMLCG CMGYAAFGDA APGNLLTGFG FYEPFWLLDV ANAAIVVHLV GAYQVYCQPL
401: FAFVEKWAAK RWPESTFVTG EVEVPLFRTY KVNMFRATWR TAFVVATTVV SMMLPFFNDV VGFLGALGFW PLTVYFPVEM YVVQKKVPKW STRWVCLQML
501: SVGCLAISLA AAAGSIAGIK SDLKVYHPFK T
Best Arabidopsis Sequence Match ( AT1G77380.1 )
(BLAST)
001: MVQNHQTVLA VDMPQTGGSK YLDDDGKNKR TGSVWTASAH IITAVIGSGV LSLAWATAQL GWLAGPVVML LFSAVTYFTS SLLAACYRSG DPISGKRNYT
101: YMDAVRSNLG GVKVTLCGIV QYLNIFGVAI GYTIASAISM MAIKRSNCFH KSGGKDPCHM NSNPYMIAFG LVQILFSQIP DFDQLWWLSI LAAVMSFTYS
201: SAGLALGIAQ VVVNGKVKGS LTGISIGAVT ETQKIWRTFQ ALGDIAFAYS YSIILIEIQD TVKSPPSEEK TMKKATLVSV SVTTMFYMLC GCMGYAAFGD
301: LSPGNLLTGF GFYNPYWLLD IANAAIVIHL IGAYQVYCQP LFAFIEKQAS IQFPDSEFIA KDIKIPIPGF KPLRLNVFRL IWRTVFVIIT TVISMLLPFF
401: NDVVGLLGAL GFWPLTVYFP VEMYIAQKKI PRWSTRWVCL QVFSLGCLVV SIAAAAGSIA GVLLDLKSYK PFRSEY
Arabidopsis Description
AAP3ATAAP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.