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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
MultiLoc:cytosol
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G351100.2 Wheat cytosol, peroxisome, plasma membrane 97.2 97.2
TraesCS2A01G331100.1 Wheat cytosol, peroxisome, plasma membrane 96.77 96.77
TraesCS2D01G331800.2 Wheat cytosol, peroxisome, plasma membrane 96.56 96.56
Os04t0470700-01 Rice plasma membrane 86.24 86.05
KXG26523 Sorghum plasma membrane 75.91 76.74
VIT_19s0015g01300.t01 Wine grape plasma membrane 60.86 61.79
VIT_19s0015g01290.t01 Wine grape plasma membrane 62.15 61.23
KRG98405 Soybean plasma membrane 59.14 59.65
KRH46488 Soybean plasma membrane 58.92 59.44
KRH73957 Soybean plasma membrane 58.92 59.44
KRG98404 Soybean plasma membrane 58.71 59.22
Solyc07g066010.2.1 Tomato plasma membrane 58.06 59.21
PGSC0003DMT400057313 Potato plasma membrane 57.85 58.99
KRH14179 Soybean plasma membrane 47.74 58.73
HORVU6Hr1G071840.3 Barley endoplasmic reticulum, golgi, plasma membrane 57.42 57.17
AT5G23810.1 Thale cress plasma membrane 54.41 54.18
Solyc07g066020.2.1 Tomato plasma membrane 54.62 54.04
KRH46483 Soybean plasma membrane 37.85 53.82
PGSC0003DMT400057311 Potato plasma membrane 54.62 53.81
KRG98402 Soybean plasma membrane 52.9 53.25
Bra026481.1-P Field mustard plasma membrane 53.33 53.1
CDX87155 Canola plasma membrane 39.78 52.56
CDY16869 Canola plasma membrane 53.12 52.55
HORVU2Hr1G111140.3 Barley golgi 55.7 52.22
Zm00001d025665_P002 Maize plasma membrane 80.86 51.16
KRG93981 Soybean plasma membrane 33.33 50.65
HORVU3Hr1G091120.3 Barley plasma membrane 52.26 50.62
HORVU2Hr1G084780.1 Barley extracellular 24.73 50.22
HORVU7Hr1G088510.2 Barley plasma membrane 49.03 49.67
KRH14166 Soybean plasma membrane 47.96 49.67
HORVU5Hr1G037660.1 Barley plasma membrane 50.97 49.48
KRH73962 Soybean plasma membrane 50.54 49.27
HORVU3Hr1G091110.1 Barley cytosol, vacuole 12.47 49.15
HORVU4Hr1G043680.3 Barley plasma membrane 50.97 48.57
HORVU7Hr1G088560.2 Barley golgi, peroxisome, plasma membrane 50.54 47.96
HORVU2Hr1G061190.4 Barley plasma membrane 49.68 47.63
HORVU7Hr1G038330.1 Barley plasma membrane 50.11 47.36
HORVU5Hr1G029060.1 Barley cytosol, peroxisome, plasma membrane 46.67 46.47
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 49.25 46.36
HORVU3Hr1G091020.2 Barley mitochondrion 52.26 45.76
HORVU3Hr1G091070.1 Barley cytosol 44.95 45.63
HORVU7Hr1G039670.2 Barley mitochondrion, peroxisome 49.68 44.68
HORVU2Hr1G084710.1 Barley plasma membrane 34.84 43.43
HORVU6Hr1G071810.8 Barley golgi, peroxisome, plasma membrane 47.74 42.13
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 46.45 41.14
Protein Annotations
EMBL:AK365200EnsemblPlants:HORVU2Hr1G081790.1EnsemblPlantsGene:HORVU2Hr1G081790GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF359PFAM:PF01490TMHMM:TMhelixUniParc:UPI000200699C
UniProt:F2DMT2MapMan:24.2.3.4.1::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DMT2]
Coordinates
chrchr2H:+:593262499..593271157
Molecular Weight (calculated)
50697.5 Da
IEP (calculated)
8.238
GRAVY (calculated)
0.413
Length
465 amino acids
Sequence
(BLAST)
001: MAFGEGGGDA TAPLISSDGP KRHPNVVRNG NEWTAAAHVI TAVIGSGVLS LAWSMAQLGW VAGPGMMVVF ASVTALQSTI FADCYRSPDP EHGPHRNRTY
101: AHAVERNLGS SSAWVCQLLQ QTALFGYGIA YTITASISFR AILKANCYHA HGHDAPCSFD GSYYMLMFGG AQLLLSSIPD FHDMAWLSVV AAVMSFSYAF
201: IGLGLGLAST ISNGVIKGSI TGVPTKTPLA KVWRVSQAIG DIAFAYPYSL ILLEIQDTLK SPPAENKTMK KASIISILVT TFFYLCCGCF GYAAFGSDAP
301: GNLLTGFGFY EPYWLIDFAN ACIILHLLGG YQVYSQPIYQ FADRYFAERY PGSGFVNDFH TVKVPLLPPY RVNLLRVCFR TVYVGSTTAV ALFFPYFNEI
401: LALLGALNFW PLAIYFPVEM YFIQRKVPRW STRWLVLQGF STVCLLVSAF ALVGSIQGVI SQKLG
Best Arabidopsis Sequence Match ( AT5G23810.1 )
(BLAST)
001: MDIKEDDESR VITPTELQLH DSVTARTGTL WTAVAHIITG VIGAGVLSLA WATAELGWIA GPAALIAFAG VTLLSAFLLS DCYRFPDPNN GPLRLNSYSQ
101: AVKLYLGKKN EIVCGVVVYI SLFGCGIAYT IVIATCSRAI MKSNCYHRNG HNATCSYGDN NNYFMVLFGL TQIFMSQIPN FHNMVWLSLV AAIMSFTYSF
201: IGIGLALGKI IENRKIEGSI RGIPAENRGE KVWIVFQALG NIAFSYPFSI ILLEIQDTLR SPPAEKQTMK KASTVAVFIQ TFFFFCCGCF GYAAFGDSTP
301: GNLLTGFGFY EPFWLVDFAN ACIVLHLVGG YQVYSQPIFA AAERSLTKKY PENKFIARFY GFKLPLLRGE TVRLNPMRMC LRTMYVLITT GVAVMFPYFN
401: EVLGVVGALA FWPLAVYFPV EMCILQKKIR SWTRPWLLLR GFSFVCLLVC LLSLVGSIYG LVGAKFG
Arabidopsis Description
AAP7Probable amino acid permease 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF99]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.