Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G331800.2 | Wheat | cytosol, peroxisome, plasma membrane | 97.85 | 97.85 |
| TraesCS2A01G331100.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.63 | 97.63 |
| HORVU2Hr1G081790.1 | Barley | cytosol, peroxisome, plasma membrane | 97.2 | 97.2 |
| Os04t0470700-01 | Rice | plasma membrane | 85.38 | 85.19 |
| KXG26523 | Sorghum | plasma membrane | 75.27 | 76.09 |
| VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 60.43 | 61.35 |
| VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 61.29 | 60.38 |
| KRH73957 | Soybean | plasma membrane | 59.35 | 59.87 |
| KRG98404 | Soybean | plasma membrane | 58.92 | 59.44 |
| KRG98405 | Soybean | plasma membrane | 58.92 | 59.44 |
| KRH46488 | Soybean | plasma membrane | 58.71 | 59.22 |
| Solyc07g066010.2.1 | Tomato | plasma membrane | 58.06 | 59.21 |
| KRH14179 | Soybean | plasma membrane | 47.96 | 58.99 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 57.85 | 58.99 |
| TraesCS2B01G527800.1 | Wheat | plasma membrane | 59.78 | 57.44 |
| TraesCS6B01G314000.1 | Wheat | golgi, peroxisome, plasma membrane | 56.99 | 56.38 |
| KRH46483 | Soybean | plasma membrane | 38.49 | 54.74 |
| Solyc07g066020.2.1 | Tomato | plasma membrane | 54.84 | 54.26 |
| TraesCS6B01G314200.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.42 | 54.16 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 54.84 | 54.03 |
| AT5G23810.1 | Thale cress | plasma membrane | 54.19 | 53.96 |
| KRG98402 | Soybean | plasma membrane | 53.55 | 53.9 |
| Bra026481.1-P | Field mustard | plasma membrane | 53.12 | 52.89 |
| CDY16869 | Canola | plasma membrane | 52.9 | 52.34 |
| CDX87155 | Canola | plasma membrane | 39.57 | 52.27 |
| Zm00001d025665_P002 | Maize | plasma membrane | 80.86 | 51.16 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 52.26 | 50.62 |
| TraesCS2B01G493000.1 | Wheat | plasma membrane | 52.26 | 50.52 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 52.04 | 50.42 |
| KRG93981 | Soybean | plasma membrane | 33.12 | 50.33 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 51.18 | 49.69 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 50.11 | 49.47 |
| TraesCS7B01G093200.1 | Wheat | peroxisome | 51.4 | 49.38 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 51.61 | 49.28 |
| TraesCS7B01G100100.1 | Wheat | peroxisome | 50.11 | 49.26 |
| KRH14166 | Soybean | plasma membrane | 47.53 | 49.22 |
| KRH73962 | Soybean | plasma membrane | 50.11 | 48.85 |
| TraesCS7B01G271200.1 | Wheat | peroxisome | 51.18 | 48.57 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 49.25 | 47.41 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 50.11 | 47.07 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 46.24 | 46.44 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 52.47 | 45.95 |
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 46.24 | 45.74 |
| TraesCS3B01G420700.1 | Wheat | plasma membrane | 44.09 | 43.8 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 49.89 | 41.43 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G351100.2 | EnsemblPlantsGene:TraesCS2B01G351100 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF359 | PFAM:PF01490 |
| TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:498416491..498427366
Molecular Weight (calculated)
50872.8 Da
IEP (calculated)
8.238
GRAVY (calculated)
0.409
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFGEGGGDA TAPLISSDGQ KRHLNIVRNG NEWTASAHVI TAVIGSGVLS LAWSMAQLGW VAGPGMMVVF ASVTALQSTI FADCYRSPDP EHGPHRNRTY
101: AHAVERNLGS GSAWVCQLLQ QTALFGYGIA YTITASISFR AILKANCYHA HGHDAPCSFD GSYYMLMFGG VQLLLSSIPD FHDMAWLSVL AAVMSFSYAF
201: IGLGLGLSNT ISNGVIKGSI TGVPMKTPLA KVWRVSQAIG DIAFAYPYSL ILLEIQDTLK SPPAENKTMK KASIISILVT TFFYLCCGCF GYAAFGNDAP
301: GNLLTGFGFY EPYWLIDFAN ACIILHLLGG YQVYSQPIYQ FADRYFAERY PGSGFVNDFH TVKVPLLPPY RVNLLRVCFR TAYVASTTAV ALFFPYFNEI
401: LALLGALNFW PLAIYFPVEM YFIQRKVPRW STRWLVLQGF STVCLLVSAF ALVGSIQGVI SQKLG
101: AHAVERNLGS GSAWVCQLLQ QTALFGYGIA YTITASISFR AILKANCYHA HGHDAPCSFD GSYYMLMFGG VQLLLSSIPD FHDMAWLSVL AAVMSFSYAF
201: IGLGLGLSNT ISNGVIKGSI TGVPMKTPLA KVWRVSQAIG DIAFAYPYSL ILLEIQDTLK SPPAENKTMK KASIISILVT TFFYLCCGCF GYAAFGNDAP
301: GNLLTGFGFY EPYWLIDFAN ACIILHLLGG YQVYSQPIYQ FADRYFAERY PGSGFVNDFH TVKVPLLPPY RVNLLRVCFR TAYVASTTAV ALFFPYFNEI
401: LALLGALNFW PLAIYFPVEM YFIQRKVPRW STRWLVLQGF STVCLLVSAF ALVGSIQGVI SQKLG
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.