Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G265600.1 | Wheat | golgi, peroxisome, plasma membrane | 95.74 | 95.34 |
| TraesCS6A01G285200.1 | Wheat | golgi, peroxisome, plasma membrane | 93.62 | 94.02 |
| TraesCS6B01G314200.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.79 | 76.06 |
| Os02t0722400-01 | Rice | endoplasmic reticulum, plasma membrane | 71.06 | 73.89 |
| EES07345 | Sorghum | golgi, peroxisome, plasma membrane | 73.4 | 73.4 |
| Zm00001d017880_P006 | Maize | plasma membrane | 71.7 | 68.64 |
| HORVU6Hr1G071810.8 | Barley | golgi, peroxisome, plasma membrane | 75.96 | 67.74 |
| GSMUA_Achr3P10920_001 | Banana | plasma membrane | 57.45 | 57.94 |
| TraesCS2B01G351100.2 | Wheat | cytosol, peroxisome, plasma membrane | 56.38 | 56.99 |
| VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 53.19 | 54.59 |
| CDX87155 | Canola | plasma membrane | 40.43 | 53.98 |
| VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 54.04 | 53.81 |
| KRH14179 | Soybean | plasma membrane | 42.98 | 53.44 |
| KRG98405 | Soybean | plasma membrane | 51.91 | 52.93 |
| KRH46488 | Soybean | plasma membrane | 51.28 | 52.28 |
| KRH73957 | Soybean | plasma membrane | 50.85 | 51.84 |
| KRG98404 | Soybean | plasma membrane | 50.85 | 51.84 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 50.21 | 51.75 |
| Solyc07g066010.2.1 | Tomato | plasma membrane | 50.0 | 51.54 |
| Bra026481.1-P | Field mustard | plasma membrane | 50.85 | 51.18 |
| AT5G23810.1 | Thale cress | plasma membrane | 50.85 | 51.18 |
| KRG93981 | Soybean | plasma membrane | 33.19 | 50.98 |
| CDY16869 | Canola | plasma membrane | 50.64 | 50.64 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 50.43 | 50.21 |
| Solyc07g066020.2.1 | Tomato | plasma membrane | 50.0 | 50.0 |
| TraesCS2B01G527800.1 | Wheat | plasma membrane | 50.85 | 49.38 |
| KRG98402 | Soybean | plasma membrane | 48.09 | 48.92 |
| KRH14166 | Soybean | plasma membrane | 45.11 | 47.22 |
| KRH46483 | Soybean | plasma membrane | 32.55 | 46.79 |
| KRH73962 | Soybean | plasma membrane | 47.02 | 46.33 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 46.81 | 45.83 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 46.38 | 45.42 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 45.74 | 44.89 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 43.83 | 44.49 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 45.74 | 44.15 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 46.17 | 43.84 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 43.83 | 43.74 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 44.89 | 43.69 |
| TraesCS2B01G493000.1 | Wheat | plasma membrane | 44.68 | 43.66 |
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 42.98 | 42.98 |
| TraesCS7B01G100100.1 | Wheat | peroxisome | 43.19 | 42.92 |
| TraesCS7B01G271200.1 | Wheat | peroxisome | 43.62 | 41.84 |
| TraesCS7B01G093200.1 | Wheat | peroxisome | 42.98 | 41.74 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 47.02 | 41.62 |
| TraesCS3B01G420700.1 | Wheat | plasma membrane | 41.28 | 41.45 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 44.89 | 37.68 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G314000.1 | EnsemblPlantsGene:TraesCS6B01G314000 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF228 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:561704509..561712827
Molecular Weight (calculated)
50681.4 Da
IEP (calculated)
8.759
GRAVY (calculated)
0.411
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRGGDPQT GPLLEKLPES SCSSSEPEQH PVKRTGTVWT ASAHIITAVV GSGVLSLAWS VAQLGWVGGP AAIVFFAGVT VVQSSLLAEC YVSRGDPERG
101: GLIRNKSYMN AVRFYLGEKR QMFSGFFLSI SLFGSGVVYT LTTATSMRAI HEANRYGREG QGAPLSTAAA GGSDVYYMLL FGLAQAVLSQ IPDFHNMAWL
201: SVFAAVMSFF YSFVGFGLGA AKVIENGVIK GGIGGIPLVS PVQKVWRVAQ SLGDIAFAYP YTLVLLEIED TLRSPPAESK TMKKASRASI AVTTFFYLGC
301: GCFGYAAFGD GTPGNLLTGF GEPYWLIDLA NLCVVLHLLG GYQLYSQPAF AVVERRFGVE AWVVEVELPL LGWRRRVNVF RLCFRTAYVA AVTAVAVWYP
401: YFNQVVGLIG AFTFWPLDIH FPVQMYLAQN KVAPWTTRWL AIQAFSATCL LVAAFASVGS AVGVFGPNRT
101: GLIRNKSYMN AVRFYLGEKR QMFSGFFLSI SLFGSGVVYT LTTATSMRAI HEANRYGREG QGAPLSTAAA GGSDVYYMLL FGLAQAVLSQ IPDFHNMAWL
201: SVFAAVMSFF YSFVGFGLGA AKVIENGVIK GGIGGIPLVS PVQKVWRVAQ SLGDIAFAYP YTLVLLEIED TLRSPPAESK TMKKASRASI AVTTFFYLGC
301: GCFGYAAFGD GTPGNLLTGF GEPYWLIDLA NLCVVLHLLG GYQLYSQPAF AVVERRFGVE AWVVEVELPL LGWRRRVNVF RLCFRTAYVA AVTAVAVWYP
401: YFNQVVGLIG AFTFWPLDIH FPVQMYLAQN KVAPWTTRWL AIQAFSATCL LVAAFASVGS AVGVFGPNRT
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.