Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G500000.1 | Wheat | plasma membrane | 97.93 | 98.14 |
| TraesCS2A01G499800.1 | Wheat | plasma membrane | 95.87 | 95.67 |
| HORVU2Hr1G111140.3 | Barley | golgi | 91.53 | 89.31 |
| EES11591 | Sorghum | plasma membrane | 73.14 | 74.37 |
| Os04t0659800-00 | Rice | plasma membrane | 73.97 | 66.17 |
| Zm00001d001984_P001 | Maize | mitochondrion | 72.52 | 63.24 |
| KRH14179 | Soybean | plasma membrane | 47.52 | 60.85 |
| TraesCS2B01G351100.2 | Wheat | cytosol, peroxisome, plasma membrane | 57.44 | 59.78 |
| KRH73957 | Soybean | plasma membrane | 56.82 | 59.65 |
| VIT_19s0015g01300.t01 | Wine grape | plasma membrane | 55.99 | 59.17 |
| KRG98404 | Soybean | plasma membrane | 55.58 | 58.35 |
| KRG98405 | Soybean | plasma membrane | 55.37 | 58.13 |
| PGSC0003DMT400057313 | Potato | plasma membrane | 54.75 | 58.11 |
| Solyc07g066010.2.1 | Tomato | plasma membrane | 54.75 | 58.11 |
| KRH46488 | Soybean | plasma membrane | 54.75 | 57.48 |
| VIT_19s0015g01290.t01 | Wine grape | plasma membrane | 54.75 | 56.14 |
| CDX87155 | Canola | plasma membrane | 39.67 | 54.55 |
| KRG93981 | Soybean | plasma membrane | 34.3 | 54.25 |
| AT5G23810.1 | Thale cress | plasma membrane | 51.65 | 53.53 |
| Bra026481.1-P | Field mustard | plasma membrane | 50.41 | 52.25 |
| CDY16869 | Canola | plasma membrane | 50.41 | 51.91 |
| TraesCS6B01G314000.1 | Wheat | golgi, peroxisome, plasma membrane | 49.38 | 50.85 |
| KRH46483 | Soybean | plasma membrane | 34.09 | 50.46 |
| KRG98402 | Soybean | plasma membrane | 47.31 | 49.57 |
| Solyc07g066020.2.1 | Tomato | plasma membrane | 47.73 | 49.15 |
| TraesCS2B01G493000.1 | Wheat | plasma membrane | 48.76 | 49.06 |
| KRH14166 | Soybean | plasma membrane | 45.45 | 49.0 |
| PGSC0003DMT400057311 | Potato | plasma membrane | 47.73 | 48.94 |
| KRH73962 | Soybean | plasma membrane | 47.31 | 48.01 |
| TraesCS7B01G093200.1 | Wheat | peroxisome | 47.93 | 47.93 |
| TraesCS7B01G100100.1 | Wheat | peroxisome | 46.69 | 47.78 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 46.49 | 47.77 |
| TraesCS6B01G314200.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.55 | 47.67 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 47.11 | 47.5 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 47.73 | 47.43 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 46.9 | 47.29 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 46.49 | 46.97 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 46.69 | 46.79 |
| TraesCS7B01G271200.1 | Wheat | peroxisome | 45.66 | 45.1 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 45.45 | 44.44 |
| TraesCS3B01G420700.1 | Wheat | plasma membrane | 42.15 | 43.59 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 41.12 | 42.98 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 47.11 | 42.94 |
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 41.12 | 42.34 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 45.87 | 39.64 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G527800.1 | EnsemblPlantsGene:TraesCS2B01G527800 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF320 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:722324948..722326595
Molecular Weight (calculated)
52479.0 Da
IEP (calculated)
8.639
GRAVY (calculated)
0.467
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSHRGGQP LDLDAAPAAP VLDDDGRVAR TGNLWTCVAH IITGVIGAGV LALSWSVAQL GWVAGPVAMV CFAAVTYVSA VLLSHCYRSP APAAPGGSDL
101: PSSEGDKTRR NYTYMGAVRA LLGRKHTYVC GSLQYLYLYG IGVAYTITTA TCLGAIKKAN CYHDHGRGAA RCTSDDREQH LFMLLFGIAQ LVLSFIPNFH
201: SMAWLSVVAA VMSFTYSTIG LGLGLSKTIG DGGIRGSVAG VPMHTPMQKV WRVSQAIGDI AFAYPYSIVL LEIQDTLRSS PPEGETLRKG NVIAMLATTF
301: FYLCVGCFGY AAFGNAAPGN LLTGFGFYEP YWLVDFANAC IVLHILGGYQ FFSQQIFTVW DRWLAARFPE SAFVCRTYAV RLVPGLPRYG LNLQRVCFRT
401: AYVASTTALA VVFPYFNEVL GLLGALIFWP LIIYLPVEMY CVQRRVRAWT PTWVALQAFS VACFAVGTFA FVGCVQGVVQ KRLG
101: PSSEGDKTRR NYTYMGAVRA LLGRKHTYVC GSLQYLYLYG IGVAYTITTA TCLGAIKKAN CYHDHGRGAA RCTSDDREQH LFMLLFGIAQ LVLSFIPNFH
201: SMAWLSVVAA VMSFTYSTIG LGLGLSKTIG DGGIRGSVAG VPMHTPMQKV WRVSQAIGDI AFAYPYSIVL LEIQDTLRSS PPEGETLRKG NVIAMLATTF
301: FYLCVGCFGY AAFGNAAPGN LLTGFGFYEP YWLVDFANAC IVLHILGGYQ FFSQQIFTVW DRWLAARFPE SAFVCRTYAV RLVPGLPRYG LNLQRVCFRT
401: AYVASTTALA VVFPYFNEVL GLLGALIFWP LIIYLPVEMY CVQRRVRAWT PTWVALQAFS VACFAVGTFA FVGCVQGVVQ KRLG
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.