Factsheet for TraesCS1B01G275200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G264700.1	Wheat	golgi, peroxisome, vacuole	86.25	98.57
TraesCS1A01G264500.1	Wheat	golgi, peroxisome, plasma membrane	85.36	97.35
HORVU1Hr1G064970.10	Barley	golgi, mitochondrion, peroxisome	85.71	97.17
OQU78029	Sorghum	cytosol, peroxisome, plasma membrane	76.25	88.04
Os05t0424000-01	Rice	cytosol, plasma membrane, vacuole	77.5	87.5
Zm00001d010231_P001	Maize	plasma membrane	73.21	85.77
TraesCS3B01G441200.1	Wheat	plasma membrane	70.71	82.5
TraesCS3B01G441100.1	Wheat	plasma membrane	70.54	82.29
GSMUA_Achr3P02860_001	Banana	peroxisome, plasma membrane, vacuole	61.07	76.51
TraesCS3B01G441300.2	Wheat	cytosol, peroxisome, plasma membrane, plastid	72.5	76.46
GSMUA_Achr10P...	Banana	plasma membrane	56.61	76.02
GSMUA_Achr2P20670_001	Banana	plasma membrane	59.46	75.51
PGSC0003DMT400030727	Potato	plasma membrane	62.86	74.42
Solyc06g060110.2.1	Tomato	plasma membrane	62.32	74.1
GSMUA_Achr6P12890_001	Banana	peroxisome, plasma membrane, vacuole	63.75	73.61
TraesCS5B01G116100.1	Wheat	plasma membrane	62.5	73.07
Bra015673.1-P	Field mustard	plasma membrane	61.61	72.48
TraesCS4B01G100800.1	Wheat	plasma membrane	62.86	72.28
CDX88364	Canola	plasma membrane	61.25	72.06
VIT_18s0001g02020.t01	Wine grape	cytosol, peroxisome, plasma membrane	61.79	71.93
CDX87522	Canola	plasma membrane	61.07	71.85
CDX88365	Canola	plasma membrane	60.89	71.64
PGSC0003DMT400015426	Potato	plasma membrane	61.25	71.61
AT1G77380.1	Thale cress	plasma membrane	60.36	71.01
AT5G63850.1	Thale cress	plasma membrane	58.93	70.82
VIT_10s0116g01380.t01	Wine grape	plasma membrane	56.79	70.2
Solyc11g005070.1.1	Tomato	plasma membrane	59.46	69.96
CDY39844	Canola	plasma membrane	58.04	69.74
Bra029199.1-P	Field mustard	plasma membrane	57.86	69.53
CDY31348	Canola	plasma membrane	57.68	69.31
PGSC0003DMT400043280	Potato	plasma membrane	57.68	69.02
CDX69918	Canola	plasma membrane	59.46	68.66
CDY21569	Canola	plasma membrane	59.46	68.66
KRH53283	Soybean	golgi, peroxisome, plasma membrane	59.64	68.58
KRH17988	Soybean	plasma membrane	58.57	68.48
CDY43761	Canola	plasma membrane	56.96	68.45
Bra009371.1-P	Field mustard	plasma membrane	59.29	68.45
CDX84450	Canola	plasma membrane	56.79	68.24
Bra024241.1-P	Field mustard	plasma membrane	56.79	68.24
KRH64623	Soybean	cytosol, peroxisome, plasma membrane	59.29	68.17
CDX78353	Canola	plasma membrane	59.29	68.17
CDX81121	Canola	plasma membrane	59.11	67.97
Bra006016.1-P	Field mustard	plasma membrane	59.11	67.97
KRH16402	Soybean	plasma membrane	58.04	67.85
AT5G09220.1	Thale cress	cytosol, peroxisome, plasma membrane	59.64	67.75
CDY36017	Canola	plasma membrane	57.68	67.15
Bra014020.1-P	Field mustard	plasma membrane	57.32	66.74
CDY60629	Canola	plasma membrane	49.29	66.51
CDY43854	Canola	plasma membrane	57.5	66.12
Bra032199.1-P	Field mustard	plasma membrane	57.5	66.12
PGSC0003DMT400008650	Potato	plasma membrane	54.64	65.95
AT1G44100.1	Thale cress	plasma membrane	55.71	65.0
VIT_07s0031g02340.t01	Wine grape	peroxisome	64.64	64.3
CDY14972	Canola	plasma membrane	54.64	64.29
Bra036939.1-P	Field mustard	plasma membrane	54.64	64.29
TraesCS5B01G120000.1	Wheat	plasma membrane	53.93	64.12
CDY47793	Canola	plasma membrane	54.29	63.87
CDY71454	Canola	golgi, peroxisome, plasma membrane	31.43	62.86
TraesCS7B01G271200.1	Wheat	peroxisome	51.61	58.98
TraesCS7B01G093200.1	Wheat	peroxisome	49.82	57.64
TraesCS2B01G367000.1	Wheat	plasma membrane	50.71	57.37
TraesCS2B01G493000.1	Wheat	plasma membrane	48.93	56.96
TraesCS2B01G266600.1	Wheat	plasma membrane	48.93	56.73
TraesCS7B01G100100.1	Wheat	peroxisome	47.5	56.24
TraesCS2B01G351100.2	Wheat	cytosol, peroxisome, plasma membrane	41.43	49.89
TraesCS3B01G420700.1	Wheat	plasma membrane	41.07	49.15
TraesCS3B01G420600.1	Wheat	plasma membrane	40.0	47.66
TraesCS5B01G120800.1	Wheat	plasma membrane	39.29	47.52
TraesCS2B01G527800.1	Wheat	plasma membrane	39.64	45.87
TraesCS6B01G314200.1	Wheat	cytosol, peroxisome, plasma membrane	40.0	45.44
TraesCS6B01G314000.1	Wheat	golgi, peroxisome, plasma membrane	37.68	44.89

Protein Annotations

EnsemblPlants:TraesCS1B01G275200.1	EnsemblPlantsGene:TraesCS1B01G275200	InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF295	PFAM:PF01490
SEG:seg	TMHMM:TMhelix	MapMan:24.2.3.4.1	:	:	:

Description

No Description!

Coordinates

chr1B:+:482695355..482698471

Molecular Weight (calculated)

61210.6 Da

IEP (calculated)

9.194

GRAVY (calculated)

0.313

Length

560 amino acids

Sequence
(BLAST)

001: MHGTRKRRIV HPKASPAHPY KYRGRWAHLN TPSQQVTPHL LTQHFRSPEL VSSLPCKGRG DRVEGTFSCK EMGENGVGKN YYQGSAAAAM EVSSVEHGQA
101: GGSKCYDDDG RLKRTGTMWT ASAHIITAVI GSGVLSLAWA IGQLGWVAGP AVMLLFSLVT YYTSSLLSDC YRSGDETTGK RNYTYMDAVN ANLSGIKVQL
201: CGFLQYANIV GVAIGYTIAA SISMLAIKRA NCFHVKGHVN PCHISSTPYM IIFGVAEIFF SQIPDFDQIS WLSILAAIMS FTYSTIGLGL GIVQVVANKG
301: VKGSLTGISI GVVTPMDKVW RSLQAFGDIA FAYSYSLILI EIQDTIRAPP PSEAKVMRRA TVVSVATTTL FYMLCGCMGY AAFGDNAPGN LLTGFGFYEP
401: FWLLDIANAA IVVHLVGAYQ VYCQPLFAFV EKWAQQRWPK SGFITREIQV PLVSSGFKLN LFRLTWRSAF VVATTVVSML LPFFNDVVGF LGAIGFWPLT
501: VYFPVEMYIV QKKIPKWSSQ WVCLQLLSLA CLIITIAAAA GSIAGIMSDL KVYKPFSTTD

Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)

001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY

Arabidopsis Description

AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.