Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G388000.2 | Wheat | plasma membrane | 95.73 | 96.97 |
| TraesCS3D01G381500.1 | Wheat | plasma membrane | 97.86 | 87.57 |
| KXG33808 | Sorghum | plasma membrane | 81.62 | 81.28 |
| Zm00001d012229_P001 | Maize | plasma membrane | 79.06 | 80.26 |
| Os01t0878700-02 | Rice | plasma membrane | 79.49 | 79.83 |
| VIT_18s0041g01270.t01 | Wine grape | plasma membrane | 55.77 | 57.36 |
| TraesCS3B01G420600.1 | Wheat | plasma membrane | 55.13 | 54.89 |
| TraesCS2B01G493000.1 | Wheat | plasma membrane | 54.49 | 53.01 |
| TraesCS7B01G100100.1 | Wheat | peroxisome | 53.42 | 52.85 |
| TraesCS7B01G093200.1 | Wheat | peroxisome | 52.99 | 51.24 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 50.21 | 50.76 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 51.28 | 49.28 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 50.64 | 49.07 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 50.0 | 48.75 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 50.0 | 48.75 |
| TraesCS7B01G271200.1 | Wheat | peroxisome | 50.0 | 47.76 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 47.44 | 47.13 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 47.65 | 46.56 |
| TraesCS2B01G351100.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.8 | 44.09 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 50.0 | 44.07 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 45.73 | 43.23 |
| TraesCS2B01G527800.1 | Wheat | plasma membrane | 43.59 | 42.15 |
| TraesCS6B01G314000.1 | Wheat | golgi, peroxisome, plasma membrane | 41.45 | 41.28 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 49.15 | 41.07 |
| TraesCS6B01G314200.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.16 | 40.97 |
| GSMUA_Achr5P01300_001 | Banana | extracellular, plasma membrane, plastid | 69.23 | 29.78 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G420700.1 | EnsemblPlantsGene:TraesCS3B01G420700 | InterPro:AA_transpt_TM | ncoils:Coil | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF274 |
| PFAM:PF01490 | SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : |
Description
No Description!
Coordinates
chr3B:-:657780697..657784827
Molecular Weight (calculated)
50233.7 Da
IEP (calculated)
8.875
GRAVY (calculated)
0.570
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEKVTEVA PEVDDDGRVR TGTVWTATTH AITAVIGSGV LALPWSVAQM GWVLGPIALI GCAYITYFTA CLLSDCYRSP DPVHGKRNYT YMDAVRSCLG
101: PREVVVCGIT QYTILCGAVV GYTITAATGI MSVVRSNCRH YKGHGADCSQ EGTMYLVMFG VVEVVLSQLP SLEKVTFVSI VAAVMSFTYS FVALFLSAAK
201: FASNHKASGT IFGSHIGGPG GVSAATRTWS FLQALGNIAF AYTYAMLLVE IQDTVKAPPS ENVTMKRASM YGIGVTTAFY VSLGCIGYAA FGNAAPGNIL
301: TGFDEPFWLV DLANIAVVIH LVGAYQVYVQ PVFACYEKKL RARYPDAAFF HRELALRLPG RRGALRFTMA KLVLRTAFVV ATTVVSLMLP FFNAILGLLG
401: AAAFFPLTVY FPVTMYITQA KVPRGSGKWV ALQALNVGAL VVSLLAAVGS VADIVQRLGH VTMFKTQL
101: PREVVVCGIT QYTILCGAVV GYTITAATGI MSVVRSNCRH YKGHGADCSQ EGTMYLVMFG VVEVVLSQLP SLEKVTFVSI VAAVMSFTYS FVALFLSAAK
201: FASNHKASGT IFGSHIGGPG GVSAATRTWS FLQALGNIAF AYTYAMLLVE IQDTVKAPPS ENVTMKRASM YGIGVTTAFY VSLGCIGYAA FGNAAPGNIL
301: TGFDEPFWLV DLANIAVVIH LVGAYQVYVQ PVFACYEKKL RARYPDAAFF HRELALRLPG RRGALRFTMA KLVLRTAFVV ATTVVSLMLP FFNAILGLLG
401: AAAFFPLTVY FPVTMYITQA KVPRGSGKWV ALQALNVGAL VVSLLAAVGS VADIVQRLGH VTMFKTQL
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.