Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G381400.1 | Wheat | plasma membrane | 100.0 | 99.79 |
| TraesCS3A01G388100.1 | Wheat | plasma membrane | 99.79 | 99.58 |
| HORVU3Hr1G081610.2 | Barley | peroxisome, plasma membrane | 98.51 | 88.19 |
| Os01t0878400-01 | Rice | plasma membrane | 87.02 | 87.96 |
| OQU87977 | Sorghum | plasma membrane | 86.81 | 87.55 |
| Zm00001d042636_P002 | Maize | plasma membrane | 86.38 | 86.75 |
| Zm00001d012231_P002 | Maize | plasma membrane | 83.83 | 78.64 |
| TraesCS5B01G120800.1 | Wheat | plasma membrane | 60.43 | 61.34 |
| TraesCS3B01G420700.1 | Wheat | plasma membrane | 54.89 | 55.13 |
| TraesCS7B01G100100.1 | Wheat | peroxisome | 50.43 | 50.11 |
| TraesCS5B01G116100.1 | Wheat | plasma membrane | 50.21 | 49.27 |
| TraesCS2B01G493000.1 | Wheat | plasma membrane | 50.21 | 49.06 |
| TraesCS4B01G100800.1 | Wheat | plasma membrane | 50.21 | 48.46 |
| TraesCS2B01G266600.1 | Wheat | plasma membrane | 49.57 | 48.24 |
| TraesCS7B01G093200.1 | Wheat | peroxisome | 49.15 | 47.73 |
| TraesCS5B01G120000.1 | Wheat | plasma membrane | 47.02 | 46.92 |
| TraesCS3B01G441200.1 | Wheat | plasma membrane | 47.66 | 46.67 |
| TraesCS3B01G441100.1 | Wheat | plasma membrane | 47.45 | 46.46 |
| TraesCS2B01G351100.2 | Wheat | cytosol, peroxisome, plasma membrane | 45.74 | 46.24 |
| TraesCS7B01G271200.1 | Wheat | peroxisome | 47.87 | 45.92 |
| TraesCS2B01G367000.1 | Wheat | plasma membrane | 45.96 | 43.64 |
| TraesCS6B01G314200.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.53 | 43.41 |
| TraesCS6B01G314000.1 | Wheat | golgi, peroxisome, plasma membrane | 42.98 | 42.98 |
| TraesCS3B01G441300.2 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 47.87 | 42.37 |
| TraesCS2B01G527800.1 | Wheat | plasma membrane | 42.34 | 41.12 |
| TraesCS1B01G275200.1 | Wheat | mitochondrion | 47.66 | 40.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G420600.1 | EnsemblPlantsGene:TraesCS3B01G420600 | InterPro:AA_transpt_TM | PANTHER:PTHR22950 | PANTHER:PTHR22950:SF257 | PFAM:PF01490 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.3.4.1 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:657649611..657651689
Molecular Weight (calculated)
50127.2 Da
IEP (calculated)
8.058
GRAVY (calculated)
0.548
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKHAAADAA AAAAAEDVET GEHERKGTVW TATAHIVTAV IGSGVLALAW SVAQLGWVAG PLALVGFACV TYYTSTLLAN AYRAPDPVTG ARNHTYTDAV
101: RSYLSPREVF MCGIAQYGNL WGTMVGYTIT ATISMVAIRR SDCVHENGQG ARCDAPGTVL MLAFTVVQVV LSQFPGLEHI TWLSVVAAVM SFAYSFIGLA
201: LSVTEWASHG LRPDGRIAGA TAASSSKKTW DVLLALGNIA FAYTFAEVLI EIQDTLKSPP SEHKTMKKAA MYGIGATTIF YISVGCAGYA AFGSDAPGNI
301: LTAPGLGPFW LVDIANMCLI LHLIGAYQVY AQPIFATAER WIVSRWPDTK FISSAYTVSI PLMQRGSVTV APYKLVLRTV IVIATTVVAM MIPFFNAVLG
401: LLGAFSFWPL TVYFPISMHI AQGKITKGTK WYLLQGLSMV CLMISVAVGI GSVSDIVDSL KVSTPFKTVS
101: RSYLSPREVF MCGIAQYGNL WGTMVGYTIT ATISMVAIRR SDCVHENGQG ARCDAPGTVL MLAFTVVQVV LSQFPGLEHI TWLSVVAAVM SFAYSFIGLA
201: LSVTEWASHG LRPDGRIAGA TAASSSKKTW DVLLALGNIA FAYTFAEVLI EIQDTLKSPP SEHKTMKKAA MYGIGATTIF YISVGCAGYA AFGSDAPGNI
301: LTAPGLGPFW LVDIANMCLI LHLIGAYQVY AQPIFATAER WIVSRWPDTK FISSAYTVSI PLMQRGSVTV APYKLVLRTV IVIATTVVAM MIPFFNAVLG
401: LLGAFSFWPL TVYFPISMHI AQGKITKGTK WYLLQGLSMV CLMISVAVGI GSVSDIVDSL KVSTPFKTVS
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.