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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042636_P002 Maize plasma membrane 93.99 93.59
Os01t0878400-01 Rice plasma membrane 88.2 88.39
TraesCS3B01G420600.1 Wheat plasma membrane 87.55 86.81
TraesCS3D01G381400.1 Wheat plasma membrane 87.55 86.62
TraesCS3A01G388100.1 Wheat plasma membrane 87.55 86.62
Zm00001d012231_P002 Maize plasma membrane 91.42 85.03
HORVU3Hr1G081610.2 Barley peroxisome, plasma membrane 87.12 77.33
EES15803 Sorghum plasma membrane 62.02 60.08
KXG33808 Sorghum plasma membrane 57.3 56.81
EES16764 Sorghum plasma membrane 53.0 51.24
EES08162 Sorghum plasma membrane 52.36 50.73
EES16761 Sorghum plasma membrane 51.93 50.63
EES15765 Sorghum plasma membrane 51.93 50.52
EES16763 Sorghum plasma membrane 51.5 49.9
KXG20176 Sorghum plasma membrane 48.71 49.67
EER97947 Sorghum golgi, peroxisome, plasma membrane 50.86 49.38
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 50.64 48.66
KXG23123 Sorghum mitochondrion, plastid 52.15 48.41
EES03989 Sorghum plasma membrane 50.86 48.27
EER88513 Sorghum peroxisome 50.64 48.07
KXG26523 Sorghum plasma membrane 46.57 47.17
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 48.71 47.1
OQU76565 Sorghum plasma membrane 47.42 46.62
EES08159 Sorghum cytosol, peroxisome, plasma membrane 48.5 46.5
EES13588 Sorghum cytosol, peroxisome, plasma membrane 49.14 45.98
EES11591 Sorghum plasma membrane 45.06 44.12
EES07345 Sorghum golgi, peroxisome, plasma membrane 43.78 43.4
Protein Annotations
EnsemblPlants:OQU87977EnsemblPlantsGene:SORBI_3003G375900EntrezGene:8063126GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF257PFAM:PF01490ProteinID:OQU87977ProteinID:OQU87977.1
RefSeq:XP_002458856.1SEG:segTMHMM:TMhelixUniParc:UPI0001A85362UniProt:A0A1W0W0S3MapMan:24.2.3.4.1
Description
hypothetical protein
Coordinates
chr3:-:69047106..69049331
Molecular Weight (calculated)
49766.9 Da
IEP (calculated)
9.053
GRAVY (calculated)
0.527
Length
466 amino acids
Sequence
(BLAST)
001: MDKSGAAADD VERGDYEQEH DRRGTVWTAT AHIVTAVIGS GVLALAWSVA QLGWVAGPLA LAGFACVTYY TSTLLANAYR APHPVTGDRN RTYMDAVRSY
101: LSPREVLMCG IAQYVNLWGT MVGYTITATI SMAAIRQSDC FHRNGAGARC DASGTVLMLA FSVVQVVLSQ FPGLEHITWL SVVAAVMSFA YSFIGLGLSV
201: GQWVSHGGGL GGRIAGATAA SSTKKLWNVL LALGNIAFAY TFAEVLIEIQ DTLKSPPPEN KTMKKAAMYG IGATTIFYIS VGCAGYAAFG SNAPGNILTA
301: GGLGPFWLVD IANMCLILHL IGAYQVYAQP IFASVERWAA SRWPEAKFIN SAYTVSIPLM QRGSVTVAPY KLVLRTVIVT ATTLVALMIP FFNAVLGLLG
401: AFSFWPLTVY FPISMHIAQG KITKGTKWYL LQALSMICLM ISVAVGIGSV TDIVSSLKVS SNPFKL
Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)
001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD
Arabidopsis Description
AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.