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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004705_P001 Maize plasma membrane 84.77 90.75
EES08162 Sorghum plasma membrane 78.19 79.0
TraesCS4D01G097400.1 Wheat plasma membrane 78.19 78.03
TraesCS4B01G100800.1 Wheat plasma membrane 77.57 77.41
TraesCS4A01G215300.1 Wheat plasma membrane 77.37 77.37
EES16761 Sorghum plasma membrane 75.93 77.2
HORVU4Hr1G043680.3 Barley plasma membrane 77.37 77.05
EES16764 Sorghum plasma membrane 75.72 76.35
EES15765 Sorghum plasma membrane 75.1 76.2
EES16763 Sorghum plasma membrane 74.69 75.47
KXG23123 Sorghum mitochondrion, plastid 73.25 70.92
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 68.72 68.87
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 67.49 68.05
GSMUA_Achr10P... Banana plasma membrane 58.02 67.63
GSMUA_Achr2P20670_001 Banana plasma membrane 61.11 67.35
EES03989 Sorghum plasma membrane 67.7 67.01
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 61.11 66.44
Bra015673.1-P Field mustard plasma membrane 64.81 66.18
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 65.84 65.98
CDX88364 Canola plasma membrane 64.61 65.97
CDX87522 Canola plasma membrane 64.2 65.55
CDX88365 Canola plasma membrane 64.2 65.55
AT1G77380.1 Thale cress plasma membrane 63.79 65.13
AT5G63850.1 Thale cress plasma membrane 61.52 64.16
Solyc06g060110.2.1 Tomato plasma membrane 62.14 64.12
CDY31348 Canola plasma membrane 61.32 63.95
PGSC0003DMT400030727 Potato plasma membrane 62.14 63.85
CDY43761 Canola plasma membrane 61.11 63.73
PGSC0003DMT400015426 Potato plasma membrane 62.76 63.67
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 62.96 63.62
Bra024241.1-P Field mustard plasma membrane 60.91 63.52
CDY39844 Canola plasma membrane 60.91 63.52
Bra029199.1-P Field mustard plasma membrane 60.91 63.52
CDX84450 Canola plasma membrane 60.49 63.09
KRH16402 Soybean plasma membrane 62.14 63.05
CDX78353 Canola plasma membrane 62.96 62.83
Bra006016.1-P Field mustard plasma membrane 62.76 62.63
CDX81121 Canola plasma membrane 62.76 62.63
KRH17988 Soybean plasma membrane 61.52 62.42
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 62.96 62.07
CDX69918 Canola plasma membrane 61.93 62.06
EES13588 Sorghum cytosol, peroxisome, plasma membrane 63.58 62.05
CDY21569 Canola plasma membrane 61.73 61.86
Bra009371.1-P Field mustard plasma membrane 61.73 61.86
VIT_10s0116g01380.t01 Wine grape plasma membrane 57.61 61.81
Solyc11g005070.1.1 Tomato plasma membrane 60.08 61.34
CDY60629 Canola plasma membrane 52.26 61.2
CDY36017 Canola plasma membrane 59.88 60.5
PGSC0003DMT400043280 Potato plasma membrane 58.23 60.47
AT1G44100.1 Thale cress plasma membrane 59.67 60.42
Bra014020.1-P Field mustard plasma membrane 59.67 60.29
KRH53283 Soybean golgi, peroxisome, plasma membrane 60.29 60.16
CDY43854 Canola plasma membrane 60.08 59.96
Bra032199.1-P Field mustard plasma membrane 60.08 59.96
KRH64623 Soybean cytosol, peroxisome, plasma membrane 59.88 59.75
CDY47793 Canola plasma membrane 57.61 58.82
CDY14972 Canola plasma membrane 56.79 57.98
Bra036939.1-P Field mustard plasma membrane 56.79 57.98
PGSC0003DMT400008650 Potato plasma membrane 54.73 57.33
CDY71454 Canola golgi, peroxisome, plasma membrane 32.51 56.43
VIT_07s0031g02340.t01 Wine grape peroxisome 65.23 56.31
EER97947 Sorghum golgi, peroxisome, plasma membrane 54.32 55.0
EER88513 Sorghum peroxisome 55.14 54.58
OQU76565 Sorghum plasma membrane 52.67 54.01
KXG20176 Sorghum plasma membrane 50.21 53.39
KXG26523 Sorghum plasma membrane 50.0 52.83
EES11591 Sorghum plasma membrane 50.41 51.47
KXG33808 Sorghum plasma membrane 48.15 49.79
OQU87977 Sorghum plasma membrane 46.5 48.5
EES07345 Sorghum golgi, peroxisome, plasma membrane 44.86 46.38
EES15803 Sorghum plasma membrane 45.27 45.74
Protein Annotations
MapMan:24.2.3.4.1EntrezGene:8074331InterPro:AA_transpt_TMUniProt:C5Y6S2EnsemblPlants:EES08159ProteinID:EES08159
ProteinID:EES08159.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF250EnsemblPlantsGene:SORBI_3005G072300unigene:Sbi.7471TMHMM:TMhelix
UniParc:UPI0001A8619BRefSeq:XP_002449171.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr5:+:8695058..8697289
Molecular Weight (calculated)
52183.6 Da
IEP (calculated)
8.737
GRAVY (calculated)
0.450
Length
486 amino acids
Sequence
(BLAST)
001: MATKAAGHAG REAALEVSSV EAGNRADAAA ARLDDDDGRP RRTGTMWTAS AHIITAVIGA GVLSLAWAMA QLGWAAGTAM MLLFAGISYY TSTLLAECYR
101: CGDSGKRNYT YTEAVRNILG GAKVRLCGVI QYANLVGIAI GYTIAAAISM RAIKRADCFH VRGHHNNKKN PCRSSSNPYM VLFGAVEVVF SQIPDFDQIW
201: WLSIVAAAMS FTYATIGLAL GIAQTVANGG FKGSLTGVAV GDGVTPMQKV WRSLQAFGDI SFAYSYAYIL IEIQDTIKAP PPSEATVMKK ATMVSVATTT
301: VFYMLCGCMG YAAFGDDAPD NLLTGFGFYE PFWLLDIANA AIVVHLVGAY QVFCQPLFAF VEKRAAARWP GSGFMAREVR LGPCFVLGVF RLTWRTAFVC
401: VTTVVAMMLP FFGDVVGLLG AVSFWPLTVY FPVEMYIAQR GVRRWSTRWV CLQTLSAACL LVSVAGAVGS TAGVIDAVKL HRPFSG
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.