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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023593_P001 Maize plasma membrane 95.22 96.02
EES15765 Sorghum plasma membrane 90.64 91.02
EES16764 Sorghum plasma membrane 90.44 90.25
EES16761 Sorghum plasma membrane 89.61 90.17
Os12t0181600-01 Rice plasma membrane 84.82 85.89
Os12t0181500-01 Rice plasma membrane 84.62 85.68
KXG23123 Sorghum mitochondrion, plastid 88.36 84.66
HORVU5Hr1G037660.1 Barley plasma membrane 84.2 84.55
TraesCS5A01G115100.1 Wheat plasma membrane 84.2 84.55
TraesCS5D01G125700.1 Wheat plasma membrane 83.99 84.34
TraesCS5B01G116100.1 Wheat plasma membrane 83.99 84.34
EES08162 Sorghum plasma membrane 79.0 79.0
EES08159 Sorghum cytosol, peroxisome, plasma membrane 75.47 74.69
GSMUA_Achr2P20670_001 Banana plasma membrane 65.49 71.43
GSMUA_Achr10P... Banana plasma membrane 61.75 71.22
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 65.9 70.92
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 71.31 70.72
EES03989 Sorghum plasma membrane 71.31 69.86
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 69.65 69.5
Bra015673.1-P Field mustard plasma membrane 68.4 69.12
CDX88364 Canola plasma membrane 68.19 68.91
Solyc06g060110.2.1 Tomato plasma membrane 67.36 68.79
CDX88365 Canola plasma membrane 67.78 68.49
CDX87522 Canola plasma membrane 67.78 68.49
PGSC0003DMT400030727 Potato plasma membrane 66.94 68.08
AT1G77380.1 Thale cress plasma membrane 67.36 68.07
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 68.4 67.84
CDY43761 Canola plasma membrane 65.7 67.81
AT5G63850.1 Thale cress plasma membrane 65.49 67.6
Bra024241.1-P Field mustard plasma membrane 65.49 67.6
CDX84450 Canola plasma membrane 64.86 66.95
CDY31348 Canola plasma membrane 64.86 66.95
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 66.74 66.74
Bra029199.1-P Field mustard plasma membrane 64.45 66.52
CDY39844 Canola plasma membrane 64.45 66.52
CDX69918 Canola plasma membrane 66.53 65.98
Bra009371.1-P Field mustard plasma membrane 66.32 65.77
CDY21569 Canola plasma membrane 66.32 65.77
PGSC0003DMT400015426 Potato plasma membrane 65.49 65.76
VIT_10s0116g01380.t01 Wine grape plasma membrane 61.54 65.34
CDX78353 Canola plasma membrane 65.9 65.09
Bra006016.1-P Field mustard plasma membrane 65.7 64.89
CDX81121 Canola plasma membrane 65.7 64.89
KRH17988 Soybean plasma membrane 64.45 64.72
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 66.11 64.5
KRH16402 Soybean plasma membrane 64.03 64.3
Solyc11g005070.1.1 Tomato plasma membrane 63.62 64.29
KRH53283 Soybean golgi, peroxisome, plasma membrane 64.86 64.07
KRH64623 Soybean cytosol, peroxisome, plasma membrane 64.03 63.24
AT1G44100.1 Thale cress plasma membrane 62.58 62.71
EES13588 Sorghum cytosol, peroxisome, plasma membrane 64.45 62.25
PGSC0003DMT400043280 Potato plasma membrane 60.5 62.18
CDY36017 Canola plasma membrane 61.95 61.95
Bra014020.1-P Field mustard plasma membrane 61.54 61.54
CDY47793 Canola plasma membrane 60.71 61.34
Bra032199.1-P Field mustard plasma membrane 61.54 60.78
CDY43854 Canola plasma membrane 61.54 60.78
CDY60629 Canola plasma membrane 52.39 60.72
CDY71454 Canola golgi, peroxisome, plasma membrane 35.34 60.71
Bra036939.1-P Field mustard plasma membrane 59.88 60.5
CDY14972 Canola plasma membrane 59.88 60.5
PGSC0003DMT400008650 Potato plasma membrane 57.8 59.91
VIT_07s0031g02340.t01 Wine grape peroxisome 69.23 59.15
EER88513 Sorghum peroxisome 57.8 56.62
EER97947 Sorghum golgi, peroxisome, plasma membrane 56.34 56.46
KXG20176 Sorghum plasma membrane 52.39 55.14
OQU76565 Sorghum plasma membrane 54.26 55.06
KXG26523 Sorghum plasma membrane 51.14 53.48
KXG33808 Sorghum plasma membrane 51.35 52.55
OQU87977 Sorghum plasma membrane 49.9 51.5
EES11591 Sorghum plasma membrane 50.94 51.47
EES07345 Sorghum golgi, peroxisome, plasma membrane 46.78 47.87
EES15803 Sorghum plasma membrane 46.57 46.57
Protein Annotations
MapMan:24.2.3.4.1EntrezGene:8082761InterPro:AA_transpt_TMUniProt:C5YT50EnsemblPlants:EES16763ProteinID:EES16763
ProteinID:EES16763.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF466EnsemblPlantsGene:SORBI_3008G059100unigene:Sbi.5228TMHMM:TMhelix
UniParc:UPI0001A87FB5RefSeq:XP_002442925.1::::
Description
hypothetical protein
Coordinates
chr8:-:6245939..6248143
Molecular Weight (calculated)
51913.0 Da
IEP (calculated)
8.194
GRAVY (calculated)
0.478
Length
481 amino acids
Sequence
(BLAST)
001: MAMASHNGGT TKHLPPMEVS MEAGNGDAAE YLDDDGRPRR TGTFWTASAH IITAVIGSGV LSLAWAIAQL GWVAGPAAML LFAFVTYYTA TLLAECYRTG
101: DPDTGKRNYT YMDAVRSNLG GARVAFCGCI QYANLVGVAI GYTIASSISM QAISRAGCFH KRGHAVPCKS SSNPYMILFG AVQILFSQIP DFDQIWWLSI
201: VAAVMSFTYS SIGLSLGIAQ TVANGGFKGS LTGISIGADV TSTQKVWHSL QAFGDIAFAY SFSNILIEIQ DTIKAPPPSE SKVMQKATRL SVATTTIFYM
301: LCGCMGYAAF GDKAPDNLLT GFGFFEPFWL IDIANIAIVV HLVGAYQVFC QPIFAFVERR AAAAWPDSAF IARELRVGPF ALSLFRLTWR SAFVCVTTVV
401: AMLLPFFGNV VGFLGAVSFW PLTVYFPVEM YIKQRRVPRG STKWICLQTL SVGCLFVSIA AAAGSIADVI DALKVYHPFS S
Best Arabidopsis Sequence Match ( AT1G44100.1 )
(BLAST)
001: MVVQNVQDLD VLPKHSSDSF DDDGRPKRTG TVWTASAHII TAVIGSGVLS LAWAVAQIGW IGGPVAMLLF SFVTFYTSTL LCSCYRSGDS VTGKRNYTYM
101: DAIHSNLGGI KVKVCGVVQY VNLFGTAIGY TIASAISLVA IQRTSCQQMN GPNDPCHVNG NVYMIAFGIV QIIFSQIPDF DQLWWLSIVA AVMSFAYSAI
201: GLGLGVSKVV ENKEIKGSLT GVTVGTVTLS GTVTSSQKIW RTFQSLGNIA FAYSYSMILI EIQDTVKSPP AEVNTMRKAT FVSVAVTTVF YMLCGCVGYA
301: AFGDNAPGNL LAHGGFRNPY WLLDIANLAI VIHLVGAYQV YCQPLFAFVE KEASRRFPES EFVTKEIKIQ LFPGKPFNLN LFRLVWRTFF VMTTTLISML
401: MPFFNDVVGL LGAIGFWPLT VYFPVEMYIA QKNVPRWGTK WVCLQVLSVT CLFVSVAAAA GSVIGIVSDL KVYKPFQSEF
Arabidopsis Description
AAP5Amino acid permease 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUM3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.