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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053143_P002 Maize plasma membrane 91.68 93.43
TraesCS4D01G097400.1 Wheat plasma membrane 82.95 81.93
TraesCS4B01G100800.1 Wheat plasma membrane 82.54 81.52
TraesCS4A01G215300.1 Wheat plasma membrane 82.33 81.48
HORVU4Hr1G043680.3 Barley plasma membrane 82.33 81.15
EES15765 Sorghum plasma membrane 79.0 79.33
EES16761 Sorghum plasma membrane 78.79 79.29
EES16763 Sorghum plasma membrane 79.0 79.0
EES16764 Sorghum plasma membrane 79.0 78.84
EES08159 Sorghum cytosol, peroxisome, plasma membrane 79.0 78.19
KXG23123 Sorghum mitochondrion, plastid 76.51 73.31
GSMUA_Achr10P... Banana plasma membrane 63.2 72.9
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 72.56 71.96
EES03989 Sorghum plasma membrane 72.56 71.08
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 70.69 70.1
GSMUA_Achr2P20670_001 Banana plasma membrane 64.24 70.07
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 65.07 70.02
PGSC0003DMT400030727 Potato plasma membrane 68.81 69.98
Solyc06g060110.2.1 Tomato plasma membrane 68.4 69.85
Bra015673.1-P Field mustard plasma membrane 68.4 69.12
CDX88364 Canola plasma membrane 68.19 68.91
CDX87522 Canola plasma membrane 67.78 68.49
CDX88365 Canola plasma membrane 67.78 68.49
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 68.19 68.05
VIT_18s0001g02020.t01 Wine grape cytosol, peroxisome, plasma membrane 67.78 67.78
AT1G77380.1 Thale cress plasma membrane 66.74 67.44
CDY31348 Canola plasma membrane 65.07 67.17
VIT_10s0116g01380.t01 Wine grape plasma membrane 63.2 67.11
AT5G63850.1 Thale cress plasma membrane 64.86 66.95
CDY43761 Canola plasma membrane 64.86 66.95
Bra024241.1-P Field mustard plasma membrane 64.66 66.74
CDY39844 Canola plasma membrane 64.66 66.74
Bra029199.1-P Field mustard plasma membrane 64.66 66.74
PGSC0003DMT400015426 Potato plasma membrane 66.32 66.6
CDX69918 Canola plasma membrane 66.74 66.19
CDX84450 Canola plasma membrane 64.03 66.09
CDY21569 Canola plasma membrane 66.53 65.98
Bra009371.1-P Field mustard plasma membrane 66.32 65.77
CDX78353 Canola plasma membrane 66.53 65.71
Bra006016.1-P Field mustard plasma membrane 66.32 65.5
CDX81121 Canola plasma membrane 66.32 65.5
KRH16402 Soybean plasma membrane 64.86 65.14
KRH17988 Soybean plasma membrane 64.86 65.14
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 66.53 64.91
Solyc11g005070.1.1 Tomato plasma membrane 64.03 64.71
KRH53283 Soybean golgi, peroxisome, plasma membrane 64.45 63.66
CDY60629 Canola plasma membrane 54.89 63.61
KRH64623 Soybean cytosol, peroxisome, plasma membrane 64.03 63.24
PGSC0003DMT400043280 Potato plasma membrane 61.33 63.03
EES13588 Sorghum cytosol, peroxisome, plasma membrane 65.07 62.85
CDY36017 Canola plasma membrane 62.79 62.79
Bra032199.1-P Field mustard plasma membrane 63.41 62.63
CDY43854 Canola plasma membrane 63.41 62.63
Bra014020.1-P Field mustard plasma membrane 62.16 62.16
AT1G44100.1 Thale cress plasma membrane 61.95 62.08
PGSC0003DMT400008650 Potato plasma membrane 59.04 61.21
VIT_07s0031g02340.t01 Wine grape peroxisome 71.1 60.75
CDY71454 Canola golgi, peroxisome, plasma membrane 35.34 60.71
CDY47793 Canola plasma membrane 60.08 60.71
CDY14972 Canola plasma membrane 59.25 59.87
Bra036939.1-P Field mustard plasma membrane 59.25 59.87
EER97947 Sorghum golgi, peroxisome, plasma membrane 56.34 56.46
EER88513 Sorghum peroxisome 55.93 54.79
KXG20176 Sorghum plasma membrane 51.35 54.05
KXG33808 Sorghum plasma membrane 52.18 53.4
OQU76565 Sorghum plasma membrane 52.6 53.38
OQU87977 Sorghum plasma membrane 50.73 52.36
KXG26523 Sorghum plasma membrane 49.27 51.52
EES11591 Sorghum plasma membrane 49.69 50.21
EES07345 Sorghum golgi, peroxisome, plasma membrane 45.95 47.02
EES15803 Sorghum plasma membrane 46.99 46.99
Protein Annotations
MapMan:24.2.3.4.1EntrezGene:8075528InterPro:AA_transpt_TMUniProt:C5Y6S5EnsemblPlants:EES08162ProteinID:EES08162
ProteinID:EES08162.1GO:GO:0003333GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0015171GO:GO:0016020GO:GO:0016021
PFAM:PF01490PANTHER:PTHR22950PANTHER:PTHR22950:SF250EnsemblPlantsGene:SORBI_3005G072500TMHMM:TMhelixUniParc:UPI0001A8619E
RefSeq:XP_002449174.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:+:8723163..8725266
Molecular Weight (calculated)
51557.9 Da
IEP (calculated)
8.234
GRAVY (calculated)
0.559
Length
481 amino acids
Sequence
(BLAST)
001: MVAKKQAPFD ELSLVEARGG GGGGGDDAEW RDDDGRPRRT GTVWTASAHI ITAVIGSGVL SLAWAIAQLG WAAGPAVMIL FAVVIYYTST LLAECYRSGD
101: PVAGKRNYTY MDAVRSSLGG AKVTLCGSIQ YANLFGVAIG YTIAASISML AIKRADCFHV KGHRNPCRSS SNPYMILFGV AEVVFSQIPD FDQIWWLSIV
201: AAVMSFTYST IGLVLGVMQT VANGGFQGSL TGISIGAGIT PTQKVWRSLQ AFGNIAFAYS YSIILIEIQD TVKAPPPSEA KVMKRATMVS VATTTVFYML
301: CGCMGYAAFG DGAPDNLLTG FGFYEPFWLL DIANVAIVVH LVGAYQVFCQ PLFAFVEKWA AATWPDSAFI ARELGAVGPF KLSAFRLAWR TAFVCLTTVV
401: AMMLPFFGDV VGLLGAVSFW PLTVYFPIEM YVVQRGVRRG STHWICLQML SVACLVVSVA AAAGSIADVI GALKVYRPFS G
Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.