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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69918 Canola plasma membrane 98.56 98.56
Bra009371.1-P Field mustard plasma membrane 98.14 98.14
CDX81121 Canola plasma membrane 95.26 94.87
CDX78353 Canola plasma membrane 95.05 94.66
AT5G09220.1 Thale cress cytosol, peroxisome, plasma membrane 92.37 90.87
CDY31348 Canola plasma membrane 82.47 85.84
CDY39844 Canola plasma membrane 82.47 85.84
CDY43761 Canola plasma membrane 81.65 84.98
CDX84450 Canola plasma membrane 80.62 83.91
CDX88364 Canola plasma membrane 72.16 73.53
CDX87522 Canola plasma membrane 71.96 73.32
CDX88365 Canola plasma membrane 71.75 73.11
GSMUA_Achr3P02860_001 Banana peroxisome, plasma membrane, vacuole 66.8 72.48
GSMUA_Achr10P... Banana plasma membrane 62.27 72.42
GSMUA_Achr2P20670_001 Banana plasma membrane 65.36 71.88
VIT_10s0116g01380.t01 Wine grape plasma membrane 66.39 71.08
GSMUA_AchrUn_... Banana cytosol, plasma membrane, vacuole 60.41 70.94
GSMUA_Achr1P28270_001 Banana peroxisome, plasma membrane, vacuole 63.71 70.55
TraesCS3A01G406800.1 Wheat plasma membrane 67.63 70.24
GSMUA_Achr6P12890_001 Banana peroxisome, plasma membrane, vacuole 69.9 69.9
Os01t0882800-01 Rice plasma membrane 69.69 69.26
HORVU3Hr1G091120.3 Barley plasma membrane 68.25 68.96
TraesCS3A01G406900.1 Wheat plasma membrane 68.25 68.96
OQU78029 Sorghum cytosol, peroxisome, plasma membrane 68.87 68.87
Zm00001d010231_P001 Maize plasma membrane 67.84 68.83
TraesCS3B01G441100.1 Wheat plasma membrane 67.63 68.33
TraesCS3B01G441200.1 Wheat plasma membrane 67.63 68.33
TraesCS3D01G402200.1 Wheat plasma membrane 67.84 68.26
TraesCS1D01G264700.1 Wheat golgi, peroxisome, vacuole 68.66 67.96
TraesCS3A01G407000.1 Wheat plasma membrane 67.22 67.92
HORVU1Hr1G064970.10 Barley golgi, mitochondrion, peroxisome 69.07 67.81
HORVU3Hr1G091110.1 Barley cytosol, vacuole 16.49 67.8
EES03989 Sorghum plasma membrane 68.45 67.62
Zm00001d053143_P002 Maize plasma membrane 65.77 67.58
Os11t0195600-01 Rice cytosol, plasma membrane, vacuole 66.19 67.44
TraesCS1A01G264500.1 Wheat golgi, peroxisome, plasma membrane 68.25 67.41
Zm00001d023603_P001 Maize plasma membrane 51.34 67.3
Zm00001d023593_P001 Maize plasma membrane 66.19 67.3
Zm00001d023592_P001 Maize plasma membrane 66.6 67.29
EES16764 Sorghum plasma membrane 66.8 67.22
Os12t0181500-01 Rice plasma membrane 65.77 67.16
Os12t0181600-01 Rice plasma membrane 65.57 66.95
EES15765 Sorghum plasma membrane 65.98 66.81
Zm00001d042619_P002 Maize plasma membrane 67.84 66.6
Os05t0424000-01 Rice cytosol, plasma membrane, vacuole 68.04 66.53
TraesCS3D01G402300.1 Wheat plasma membrane 67.63 66.53
EES08162 Sorghum plasma membrane 65.98 66.53
TraesCS5B01G116100.1 Wheat plasma membrane 65.57 66.39
TraesCS4B01G100800.1 Wheat plasma membrane 66.6 66.32
TraesCS4D01G097400.1 Wheat plasma membrane 66.6 66.32
EES16763 Sorghum plasma membrane 65.77 66.32
TraesCS4A01G215300.1 Wheat plasma membrane 66.39 66.26
Zm00001d023596_P001 Maize cytosol, peroxisome, plasma membrane 65.77 66.18
HORVU5Hr1G037660.1 Barley plasma membrane 65.36 66.18
TraesCS5A01G115100.1 Wheat plasma membrane 65.36 66.18
TraesCS5D01G125700.1 Wheat plasma membrane 65.36 66.18
EES16761 Sorghum plasma membrane 65.15 66.11
HORVU4Hr1G043680.3 Barley plasma membrane 66.39 65.98
VIT_07s0031g02340.t01 Wine grape peroxisome 76.29 65.72
GSMUA_Achr8P08250_001 Banana cytosol, peroxisome, plasma membrane, plastid 67.01 65.13
CDY36017 Canola plasma membrane 63.3 63.83
CDY60629 Canola plasma membrane 54.43 63.61
CDY43854 Canola plasma membrane 63.71 63.45
CDY14972 Canola plasma membrane 62.06 63.24
CDY47793 Canola plasma membrane 61.65 62.82
HORVU3Hr1G091020.2 Barley mitochondrion 68.45 62.52
KXG23123 Sorghum mitochondrion, plastid 64.54 62.35
TraesCS3B01G441300.2 Wheat cytosol, peroxisome, plasma membrane, plastid 68.25 62.34
HORVU3Hr1G091070.1 Barley cytosol 58.76 62.23
CDY71454 Canola golgi, peroxisome, plasma membrane 35.88 62.14
GSMUA_Achr8P32600_001 Banana plasma membrane 69.9 61.97
EES08159 Sorghum cytosol, peroxisome, plasma membrane 61.86 61.73
Zm00001d004705_P001 Maize plasma membrane 57.73 61.67
TraesCS5B01G120000.1 Wheat plasma membrane 59.79 61.57
TraesCS5A01G113300.1 Wheat cytosol, peroxisome, plasma membrane 60.0 61.39
Zm00001d041842_P002 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 64.33 60.82
TraesCS5D01G129000.1 Wheat cytosol, peroxisome, plasma membrane 57.73 60.74
TraesCS1B01G275200.1 Wheat mitochondrion 68.66 59.46
KXG23106 Sorghum cytosol, peroxisome, plasma membrane 57.73 58.09
HORVU2Hr1G084780.1 Barley extracellular 26.8 56.77
Zm00001d050211_P001 Maize peroxisome 52.37 55.95
CDY04349 Canola cytosol, peroxisome, plasma membrane 55.26 55.37
CDY57931 Canola plasma membrane 53.2 55.36
CDY46779 Canola plasma membrane 54.23 54.91
TraesCS2B01G367000.1 Wheat plasma membrane 55.67 54.55
CDY48843 Canola cytosol, peroxisome, plasma membrane 53.81 54.49
CDY53793 Canola cytosol, peroxisome, plasma membrane 53.81 54.49
EES13588 Sorghum cytosol, peroxisome, plasma membrane 55.88 54.42
CDY49542 Canola plasma membrane 23.09 54.37
CDY22609 Canola plasma membrane 53.61 54.05
CDY57932 Canola plasma membrane 51.13 53.68
CDY63746 Canola extracellular, plasma membrane 39.38 53.65
CDY53831 Canola plasma membrane 53.2 53.64
TraesCS3A01G065600.1 Wheat plasma membrane 50.52 53.26
CDY62728 Canola plasma membrane 52.37 52.7
CDY62727 Canola cytosol, peroxisome, plasma membrane 50.93 52.67
CDY44564 Canola cytosol, peroxisome, plasma membrane 55.05 52.66
CDY60248 Canola cytosol, peroxisome, plasma membrane 54.85 52.47
TraesCS7D01G388300.1 Wheat plasma membrane 56.7 52.18
CDY22607 Canola plasma membrane 51.55 51.98
TraesCS2D01G346500.1 Wheat plasma membrane 52.78 51.0
CDY22608 Canola plasma membrane 52.37 50.4
HORVU2Hr1G084710.1 Barley plasma membrane 37.73 49.06
CDY04448 Canola peroxisome 54.43 48.89
CDY16869 Canola plasma membrane 47.22 48.72
CDX87155 Canola plasma membrane 34.85 48.01
Os12t0195100-00 Rice plastid 42.68 41.73
TraesCS2D01G347000.2 Wheat cytosol, plasma membrane, vacuole 40.62 38.03
TraesCS2A01G348600.2 Wheat cytosol, plasma membrane, vacuole 40.0 37.74
CDY53832 Canola plasma membrane 51.75 23.81
Protein Annotations
EnsemblPlants:CDY21569EnsemblPlantsGene:GSBRNA2T00016031001GO:A0A078G837GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:AA_transpt_TMPANTHER:PTHR22950PANTHER:PTHR22950:SF474PFAM:PF01490ProteinID:CDY21569ProteinID:CDY21569.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EEC576UniProt:A0A078G837MapMan:24.2.3.4.1:
Description
BnaC09g47230DBnaC09g47230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G837]
Coordinates
chrLK032122:+:291288..293765
Molecular Weight (calculated)
53212.3 Da
IEP (calculated)
9.086
GRAVY (calculated)
0.478
Length
485 amino acids
Sequence
(BLAST)
001: MGATAAANNH HQHHQVFDMA VPQQPAFKCF DDDGRLKRTG TVWTASAHII TAVIGSGVLS LAWAIAQLGW VAGPAVMLLF SLVTLYSSTL LSDCYRTGDA
101: VSGKRNYTYM DAVRSILGGF KFKICGLIQY LNLFGVAIGY TIAASISMMA IKRSNCFHKS GGKDPCHMSS NPYMIIFGVT EILLSQVPDF DQIWWISIVA
201: AVMSFTYSAI GLSLGIVQVA ANGVFKGSLT GISIGAVTQT QKIWRTFQAL GDIAFAYSYS VVLIEIQDTV RSPPSESKTM KKATKLSIAI TTIFYMLCGS
301: MGYAAFGDAA PGNLLTGFGF YNPFWLLDIA NAAIVVHLIG AYQVFSQPIF AFAEKSASER FPDNDLLTKE LEFKIPGLRS PYKTNVFRVV FRCSFVVLTT
401: VISMLMPFFN DVVGILGALG FWPLTVYFPV EMYIKQRKVE KWSLRWVCLQ MLSVSCLVIS VFAGVGSIAG VMLDLKVYKP FQTTY
Best Arabidopsis Sequence Match ( AT5G09220.1 )
(BLAST)
001: MGETAAANNH RHHHHHGHQV FDVASHDFVP PQPAFKCFDD DGRLKRTGTV WTASAHIITA VIGSGVLSLA WAIAQLGWIA GPAVMLLFSL VTLYSSTLLS
101: DCYRTGDAVS GKRNYTYMDA VRSILGGFKF KICGLIQYLN LFGIAIGYTI AASISMMAIK RSNCFHKSGG KDPCHMSSNP YMIVFGVAEI LLSQVPDFDQ
201: IWWISIVAAV MSFTYSAIGL ALGIVQVAAN GVFKGSLTGI SIGTVTQTQK IWRTFQALGD IAFAYSYSVV LIEIQDTVRS PPAESKTMKK ATKISIAVTT
301: IFYMLCGSMG YAAFGDAAPG NLLTGFGFYN PFWLLDIANA AIVVHLVGAY QVFAQPIFAF IEKSVAERYP DNDFLSKEFE IRIPGFKSPY KVNVFRMVYR
401: SGFVVTTTVI SMLMPFFNDV VGILGALGFW PLTVYFPVEM YIKQRKVEKW STRWVCLQML SVACLVISVV AGVGSIAGVM LDLKVYKPFK STY
Arabidopsis Description
AAP2Amino acid permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38967]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.