CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031697.1-P	Field mustard	plasma membrane	99.17	99.38
CDY22609	Canola	plasma membrane	87.32	87.32
CDY53831	Canola	plasma membrane	86.9	86.9
CDY22608	Canola	plasma membrane	88.98	84.92
CDY57932	Canola	plasma membrane	81.5	84.85
CDY62728	Canola	plasma membrane	83.58	83.4
CDY57931	Canola	plasma membrane	78.17	80.69
CDY63746	Canola	extracellular, plasma membrane	58.21	78.65
CDY49542	Canola	plasma membrane	33.68	78.64
CDY62727	Canola	cytosol, peroxisome, plasma membrane	73.18	75.05
CDY48843	Canola	cytosol, peroxisome, plasma membrane	74.01	74.32
CDY04349	Canola	cytosol, peroxisome, plasma membrane	74.64	74.17
CDY53793	Canola	cytosol, peroxisome, plasma membrane	73.8	74.11
CDY44564	Canola	cytosol, peroxisome, plasma membrane	74.84	71.01
CDY60248	Canola	cytosol, peroxisome, plasma membrane	74.64	70.81
CDY04448	Canola	peroxisome	73.6	65.56
CDY46779	Canola	plasma membrane	64.03	64.3
EER97947	Sorghum	golgi, peroxisome, plasma membrane	59.25	59.38
GSMUA_Achr4P32180_001	Banana	plasma membrane	59.25	59.25
TraesCS2A01G268200.1	Wheat	plasma membrane	59.25	59.01
TraesCS2D01G256000.1	Wheat	plasma membrane	59.04	58.8
TraesCS2B01G266600.1	Wheat	plasma membrane	58.63	58.39
HORVU2Hr1G061190.4	Barley	plasma membrane	58.63	58.14
Os07t0134000-02	Rice	plasma membrane	58.0	57.29
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	58.0	56.82
CDY47793	Canola	plasma membrane	53.01	53.57
CDY14972	Canola	plasma membrane	53.01	53.57
CDX87522	Canola	plasma membrane	52.39	52.94
CDX88364	Canola	plasma membrane	52.39	52.94
CDX88365	Canola	plasma membrane	51.98	52.52
CDY43761	Canola	plasma membrane	50.1	51.72
CDX84450	Canola	plasma membrane	50.1	51.72
CDX69918	Canola	plasma membrane	51.98	51.55
CDY21569	Canola	plasma membrane	51.98	51.55
CDY31348	Canola	plasma membrane	49.69	51.29
CDY39844	Canola	plasma membrane	49.69	51.29
CDX78353	Canola	plasma membrane	51.77	51.13
CDX81121	Canola	plasma membrane	51.56	50.92
CDY36017	Canola	plasma membrane	50.73	50.73
CDY43854	Canola	plasma membrane	49.9	49.28
CDY60629	Canola	plasma membrane	42.41	49.16
CDY16869	Canola	plasma membrane	46.15	47.23
CDX87155	Canola	plasma membrane	34.1	46.59
CDY71454	Canola	golgi, peroxisome, plasma membrane	26.82	46.07
CDY53832	Canola	plasma membrane	99.38	45.35

Protein Annotations

EnsemblPlants:CDY22607	EnsemblPlantsGene:GSBRNA2T00019269001	GO:A0A078GC36	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY22607	ProteinID:CDY22607.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEEB6D	UniProt:A0A078GC36	MapMan:24.2.3.4.1	:

Description

BnaC08g42410DBnaC08g42410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC36]

Coordinates

chrLK032134:-:43774..47804

Molecular Weight (calculated)

52153.9 Da

IEP (calculated)

9.127

GRAVY (calculated)

0.556

Length

481 amino acids

Sequence
(BLAST)

001: MKSFDTSSVV ESGAGAGNNV DDDCREKRTG TLITASAHII TTVIGSGVLS LAWAIAQLGW VVGTVILVAF AVIVNYTSRM LADSYRSPEG TRNYTYMDVV
101: RVYLGGRKVQ LCGLAQFGSL VGVTIGYTIT ASISLVAIGK ANCFHDKGHG AKCSVSNYPL MAAFGIVQIF LSQIPNFHKL SFLSIIATVM SFSYASIGFG
201: LALAALASGK VGKTGLTGTV VGVDVTASDK LWKSFQAAGN IAFSYAYSVV LVEIQACILS INDDTLRSSP PENKVMKKAS LAAVSTTTAF YILCGCIGYA
301: TFGNQAPGDF LTDFGFYEPY WLIDFANACI AVHLIGAYQQ VFAQPIFQFV EKKCNQAWPE SNFITKEHSM NVPLLGKCRI NFFRLVWRTT YVIFSTVVAM
401: IFPFFNAILG LIGAVAFWPL TVYFPVEMHI SQKKVKKYSV RWIVLKLLVF VCLIVSLLAA IGSIVGLISS VKAYKPFHNL D

Best Arabidopsis Sequence Match ( AT1G10010.2 )
(BLAST)

001: MMDAYNNPSA VESGDAAVKS VDDDGREKRT GTFWTASAHI ITAVIGSGVL SLAWAIAQLG WVAGTTVLVA FAIITYYTST LLADCYRSPD SITGTRNYNY
101: MGVVRSYLGG KKVQLCGVAQ YVNLVGVTIG YTITASISLV AIGKSNCYHD KGHKAKCSVS NYPYMAAFGI VQIILSQLPN FHKLSFLSII AAVMSFSYAS
201: IGIGLAIATV ASGKIGKTEL TGTVIGVDVT ASEKVWKLFQ AIGDIAFSYA FTTILIEIQD TLRSSPPENK VMKRASLVGV STTTVFYILC GCIGYAAFGN
301: QAPGDFLTDF GFYEPYWLID FANACIALHL IGAYQVYAQP FFQFVEENCN KKWPQSNFIN KEYSSKVPLL GKCRVNLFRL VWRTCYVVLT TFVAMIFPFF
401: NAILGLLGAF AFWPLTVYFP VAMHIAQAKV KKYSRRWLAL NLLVLVCLIV SALAAVGSII GLINSVKSYK PFKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.