CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57931	Canola	plasma membrane	89.13	89.7
CDY57932	Canola	plasma membrane	78.46	79.65
CDY62728	Canola	plasma membrane	79.96	77.8
CDY53831	Canola	plasma membrane	76.76	74.84
CDY22609	Canola	plasma membrane	76.76	74.84
CDY22607	Canola	plasma membrane	75.05	73.18
CDY63746	Canola	extracellular, plasma membrane	53.52	70.51
CDY53793	Canola	cytosol, peroxisome, plasma membrane	71.22	69.73
CDY48843	Canola	cytosol, peroxisome, plasma membrane	71.0	69.52
CDY22608	Canola	plasma membrane	73.99	68.85
CDY04349	Canola	cytosol, peroxisome, plasma membrane	70.36	68.18
CDY44564	Canola	cytosol, peroxisome, plasma membrane	70.58	65.29
CDY60248	Canola	cytosol, peroxisome, plasma membrane	70.36	65.09
CDY49542	Canola	plasma membrane	27.29	62.14
CDY46779	Canola	plasma membrane	62.69	61.38
CDY04448	Canola	peroxisome	69.72	60.56
Bra019968.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	63.33	56.9
EER97947	Sorghum	golgi, peroxisome, plasma membrane	56.93	55.62
TraesCS2A01G268200.1	Wheat	plasma membrane	56.5	54.87
GSMUA_Achr4P32180_001	Banana	plasma membrane	56.08	54.68
TraesCS2D01G256000.1	Wheat	plasma membrane	56.29	54.66
TraesCS2B01G266600.1	Wheat	plasma membrane	55.86	54.24
HORVU2Hr1G061190.4	Barley	plasma membrane	55.86	54.02
Os07t0134000-02	Rice	plasma membrane	55.22	53.18
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	55.22	52.75
CDX87522	Canola	plasma membrane	52.88	52.1
CDX88364	Canola	plasma membrane	52.88	52.1
CDX88365	Canola	plasma membrane	52.45	51.68
CDY39844	Canola	plasma membrane	50.75	51.07
CDY31348	Canola	plasma membrane	50.75	51.07
CDX69918	Canola	plasma membrane	52.67	50.93
CDY21569	Canola	plasma membrane	52.67	50.93
CDX78353	Canola	plasma membrane	52.88	50.92
CDX81121	Canola	plasma membrane	52.88	50.92
CDY43761	Canola	plasma membrane	49.89	50.21
CDX84450	Canola	plasma membrane	49.89	50.21
CDY14972	Canola	plasma membrane	50.75	50.0
CDY47793	Canola	plasma membrane	50.11	49.37
CDY36017	Canola	plasma membrane	49.47	48.23
CDY71454	Canola	golgi, peroxisome, plasma membrane	28.57	47.86
CDX87155	Canola	plasma membrane	35.18	46.88
CDY43854	Canola	plasma membrane	48.61	46.82
CDY60629	Canola	plasma membrane	40.51	45.78
CDY16869	Canola	plasma membrane	43.92	43.83
CDY53832	Canola	plasma membrane	75.27	33.49

Protein Annotations

EnsemblPlants:CDY62727	EnsemblPlantsGene:GSBRNA2T00037532001	GO:A0A078JDT6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY62727	ProteinID:CDY62727.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEECAD	UniProt:A0A078JDT6	MapMan:24.2.3.4.1	:

Description

BnaC05g49200DBnaC05g49200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDT6]

Coordinates

chrLK034183:-:2723..6116

Molecular Weight (calculated)

51120.0 Da

IEP (calculated)

8.966

GRAVY (calculated)

0.360

Length

469 amino acids

Sequence
(BLAST)

001: MKSFDAVHNP SAVESADANV DDDGREKRTG TLMTASAHII TAVIGSGVLS LAWAIAQLGW VAGTLILVTF AIVNYYTSTM LADCYRSDAG ARNYTYMDVV
101: RSYLGGRKVQ LCGLAQYGCL VGITIGYTIT ASISLVAIWK ATCFHKKGHG AKCSIPNYPF MAAFGVVEIF LSQLPNFHKL SFLSIIAAVM SFSYASIGIG
201: LAIAVVASGK VGKTGVTGTV VGVDVTASDK IWKAFQATGD IAFSYSFSTI LVEIQDTLRS SPPENKVMKK ATLAGVSTTT VFYILCGCMG YAAFGNRAPG
301: DFLTDFGFYE PYWLINFANA CIVLHLIAAY QVFAQPIFQL VENKCNKAWP ENNFINKEHS INIPFLGKWR INFFRLVWRT AYVILTTFVA VIFPFFNSIL
401: GLIGATAFWP LTVYFPVEMH ISQRKKEFMY GPNPNFKGSR TPTPSIQQRG DTGSGNSGAA VMITVLDQF

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.