CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62727	Canola	cytosol, peroxisome, plasma membrane	89.7	89.13
CDY57932	Canola	plasma membrane	84.98	85.71
CDY62728	Canola	plasma membrane	85.62	82.78
CDY53831	Canola	plasma membrane	81.76	79.21
CDY22609	Canola	plasma membrane	81.76	79.21
CDY22607	Canola	plasma membrane	80.69	78.17
CDY63746	Canola	extracellular, plasma membrane	58.8	76.97
CDY49542	Canola	plasma membrane	32.83	74.27
CDY53793	Canola	cytosol, peroxisome, plasma membrane	75.97	73.9
CDY48843	Canola	cytosol, peroxisome, plasma membrane	75.75	73.7
CDY22608	Canola	plasma membrane	79.18	73.21
CDY04349	Canola	cytosol, peroxisome, plasma membrane	74.46	71.69
CDY60248	Canola	cytosol, peroxisome, plasma membrane	74.89	68.84
CDY44564	Canola	cytosol, peroxisome, plasma membrane	74.68	68.64
CDY04448	Canola	peroxisome	73.82	63.7
CDY46779	Canola	plasma membrane	65.24	63.47
EER97947	Sorghum	golgi, peroxisome, plasma membrane	59.66	57.92
Bra019968.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	64.81	57.85
GSMUA_Achr4P32180_001	Banana	plasma membrane	59.66	57.8
TraesCS2A01G268200.1	Wheat	plasma membrane	59.66	57.56
TraesCS2D01G256000.1	Wheat	plasma membrane	59.44	57.35
TraesCS2B01G266600.1	Wheat	plasma membrane	59.01	56.94
HORVU2Hr1G061190.4	Barley	plasma membrane	59.01	56.7
Os07t0134000-02	Rice	plasma membrane	58.58	56.06
Zm00001d018751_P001	Maize	cytosol, peroxisome, plasma membrane	58.37	55.4
CDX87522	Canola	plasma membrane	55.58	54.41
CDX88364	Canola	plasma membrane	55.58	54.41
CDX88365	Canola	plasma membrane	55.15	53.99
CDY43761	Canola	plasma membrane	53.43	53.43
CDY39844	Canola	plasma membrane	53.43	53.43
CDX84450	Canola	plasma membrane	53.43	53.43
CDY31348	Canola	plasma membrane	53.43	53.43
CDX69918	Canola	plasma membrane	55.36	53.2
CDY21569	Canola	plasma membrane	55.36	53.2
CDY14972	Canola	plasma membrane	54.29	53.15
CDY47793	Canola	plasma membrane	54.29	53.15
CDX81121	Canola	plasma membrane	55.36	52.98
CDX78353	Canola	plasma membrane	55.36	52.98
CDY36017	Canola	plasma membrane	52.79	51.14
CDY43854	Canola	plasma membrane	51.5	49.28
CDY60629	Canola	plasma membrane	43.35	48.67
CDY71454	Canola	golgi, peroxisome, plasma membrane	28.11	46.79
CDX87155	Canola	plasma membrane	35.19	46.59
CDY16869	Canola	plasma membrane	46.57	46.17
CDY53832	Canola	plasma membrane	80.9	35.77

Protein Annotations

EnsemblPlants:CDY57931	EnsemblPlantsGene:GSBRNA2T00022863001	GO:A0A078J551	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:AA_transpt_TM	PANTHER:PTHR22950	PANTHER:PTHR22950:SF278	PFAM:PF01490	ProteinID:CDY57931	ProteinID:CDY57931.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE0E54	UniProt:A0A078J551	MapMan:24.2.3.4.1	:

Description

BnaA06g38000DBnaA06g38000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J551]

Coordinates

chrLK033617:-:36268..38490

Molecular Weight (calculated)

50991.4 Da

IEP (calculated)

9.481

GRAVY (calculated)

0.508

Length

466 amino acids

Sequence
(BLAST)

001: MKSFDAVHNP SAVESADANV DDDGREKRTG TLMTASAHII TAVIGSGVLS LAWAIAQLGW VAGTLILVTF AVVNYYTSTM LADCYRSDAG ARNYTYMDVV
101: RSYLGGRKVQ LCGLAQYGCL VGVTIGYTIT ASISLVAIWK ATCFHKKGHG AKCSIPNYPF MVAFGVVEIF LSQLPNFHKL SFLSIIAAIM SFSYASIGIG
201: LAISVVASGK VGKTSVTGTV VGVDVTASDK IWKAFQATGD IAFSYSFSTI LDTLRSNPPE NKVMKKATLA GVSTTTVFYI LCGCMGYAAF GNRAPGDFLT
301: DFGFYEPYWL INFANACIVL HLIAAYQVFA QPIFQLVENK CNKAWPENNF IHKEHSINIL FLGKWRINFF RLVWRTAYVI LTTFVAVIFP FFNSILGLIG
401: ATAFWPLTVY FPVEMHISQR KVKKYSMKWN ALKLLISVCL IVSLLAAIGS IVGLINSVKA YKPFHS

Best Arabidopsis Sequence Match ( AT1G10010.1 )
(BLAST)

001: MDAYNNPSAV ESGDAAVKSV DDDGREKRTG TFWTASAHII TAVIGSGVLS LAWAIAQLGW VAGTTVLVAF AIITYYTSTL LADCYRSPDS ITGTRNYNYM
101: GVVRSYLGGK KVQLCGVAQY VNLVGVTIGY TITASISLVA IGKSNCYHDK GHKAKCSVSN YPYMAAFGIV QIILSQLPNF HKLSFLSIIA AVMSFSYASI
201: GIGLAIATVA SGKIGKTELT GTVIGVDVTA SEKVWKLFQA IGDIAFSYAF TTILIEIQDT LRSSPPENKV MKRASLVGVS TTTVFYILCG CIGYAAFGNQ
301: APGDFLTDFG FYEPYWLIDF ANACIALHLI GAYQVYAQPF FQFVEENCNK KWPQSNFINK EYSSKVPLLG KCRVNLFRLV WRTCYVVLTT FVAMIFPFFN
401: AILGLLGAFA FWPLTVYFPV AMHIAQAKVK KYSRRWLALN LLVLVCLIVS ALAAVGSIIG LINSVKSYKP FKNLD

Arabidopsis Description

AAP8amino acid permease 8 [Source:TAIR;Acc:AT1G10010]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.